GenomeNet

Database: UniProt
Entry: X2J2Q0_SALSA
LinkDB: X2J2Q0_SALSA
Original site: X2J2Q0_SALSA 
ID   X2J2Q0_SALSA            Unreviewed;       405 AA.
AC   X2J2Q0;
DT   11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT   11-JUN-2014, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   SubName: Full=CRFB5a {ECO:0000313|EMBL:AHN52533.1};
DE   SubName: Full=CRFB5b {ECO:0000313|EMBL:AIN50148.1};
DE   SubName: Full=Interferon Alpha/beta receptor 1A {ECO:0000313|RefSeq:XP_014030076.1};
GN   Name=CRFB5a {ECO:0000313|EMBL:AHN52533.1};
GN   Synonyms=LOC106586873 {ECO:0000313|RefSeq:XP_014030076.1};
OS   Salmo salar (Atlantic salmon).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Salmo.
OX   NCBI_TaxID=8030 {ECO:0000313|EMBL:AHN52533.1};
RN   [1] {ECO:0000313|EMBL:AHN52533.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Sun B., Greiner-Tollersrud L., Koop B., Robertsen B.;
RT   "Identification of Atlantic salmon interferon receptor genes.";
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AIN50148.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=25149134; DOI=10.1016/j.dci.2014.08.007;
RA   Sun B., Greiner-Tollersrud L., Koop B.F., Robertsen B.;
RT   "Atlantic salmon possesses two clusters of type I interferon receptor genes
RT   on different chromosomes, which allows for a larger repertoire of
RT   interferon receptors than in zebrafish and mammals.";
RL   Dev. Comp. Immunol. 47:275-286(2014).
RN   [3] {ECO:0000313|RefSeq:XP_014030076.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
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DR   EMBL; KF976460; AHN52533.1; -; mRNA.
DR   EMBL; KF845942; AIN50148.1; -; Genomic_DNA.
DR   RefSeq; NP_001306948.1; NM_001320019.1.
DR   RefSeq; XP_014030076.1; XM_014174601.1.
DR   GeneID; 106586873; -.
DR   KEGG; sasa:106586873; -.
DR   OrthoDB; 5320327at2759; -.
DR   Proteomes; UP000087266; Chromosome ssa25.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR   InterPro; IPR003961; FN3_dom.
DR   InterPro; IPR036116; FN3_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR015373; Interferon/interleukin_rcp_dom.
DR   PANTHER; PTHR20859; INTERFERON/INTERLEUKIN RECEPTOR; 1.
DR   PANTHER; PTHR20859:SF50; INTERLEUKIN-10 RECEPTOR SUBUNIT BETA; 1.
DR   Pfam; PF09294; Interfer-bind; 1.
DR   Pfam; PF01108; Tissue_fac; 1.
DR   SUPFAM; SSF49265; Fibronectin type III; 2.
DR   PROSITE; PS50853; FN3; 1.
PE   2: Evidence at transcript level;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Receptor {ECO:0000313|RefSeq:XP_014030076.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW   Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..20
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           21..405
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5010851826"
FT   TRANSMEM        234..257
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          126..228
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   REGION          325..375
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        344..358
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   405 AA;  46061 MW;  CF34FD48911397A3 CRC64;
     MNVGFALVLL WSLPITSVLA ELPQPQNLTL LTLNTQYVLT WDWDQTATGN AVTFTVEYMA
     KYKMMKKKKN WSRVCERTTH TRCDLTDSDL HYLGMYVVRV QASADGVNSH WVYKDFCPDM
     DASLGPPSRV ELAPVGNLLD VTISDPLTST QGSMKEHVLF LYYRILYWSL SDDPQGLKPK
     VVDSSNNLVT LPELEAWTWY CVMIQSRYDY YNKTSGYTEP QCMQTEGDTP YGQIFLYFLV
     SMVVCFLLVL LPSYTFFRFY RVLKNTFYPS IQLPAHIQEY LCDSSPGSDM PRLLTADSEA
     ELCCDKLTIC PEVVLLEIHL PPPLTAPPSE LEQDSGRHIR QDSGDSGIYS TEGGSAQQGR
     SGGEPIRRDQ EVDSWQTLEQ VKMDEMWRES ADERDLDEGV VDVCV
//
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