ID X6N885_RETFI Unreviewed; 344 AA.
AC X6N885;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Radical SAM core domain-containing protein {ECO:0000259|PROSITE:PS51918};
DE Flags: Fragment;
GN ORFNames=RFI_14714 {ECO:0000313|EMBL:ETO22485.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO22485.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO22485.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO22485.1}.
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DR EMBL; ASPP01010693; ETO22485.1; -; Genomic_DNA.
DR AlphaFoldDB; X6N885; -.
DR EnsemblProtists; ETO22485; ETO22485; RFI_14714.
DR OMA; FIEYICI; -.
DR OrthoDB; 276083at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR040072; Methyltransferase_A.
DR InterPro; IPR004383; rRNA_lsu_MTrfase_RlmN/Cfr.
DR InterPro; IPR007197; rSAM.
DR PANTHER; PTHR30544; 23S RRNA METHYLTRANSFERASE; 1.
DR PANTHER; PTHR30544:SF8; RADICAL SAM SUPERFAMILY PROTEIN; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR PIRSF; PIRSF006004; CHP00048; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 111..344
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
FT NON_TER 344
FT /evidence="ECO:0000313|EMBL:ETO22485.1"
SQ SEQUENCE 344 AA; 38744 MW; DAD4F543E5E305FA CRC64;
MSQSSKMRTL KPNTILDRES LVRFFHDHNI NQVHLSKIWR LMIKDPHLGF DDIPGLPKAA
ASLLSENFCT LTSVLKETSD SKDGRTTKLL IELQDKQMIE AVIIRHSDTR SGGHTVLCVS
SQVGCKMGCT FCATGTMGLL SQLTAGEILE QLLHAKIHLE KQQNNETQGT VNKKLERTEI
NFKKKKCLKG KIRNIVFMGM GEPLDNYDAV SEAIEGMHDR CRFNIAWNHI TVSTVGVIPK
IRTLATQFPH VNLALSLHAP NQEIRCKIVP SAKAYPMDKL MHALKYYIVC TNNKVFIEYI
CIGNVNVSEE CAHELSKMMI HYLNEVEVDT GKKPQITTKE GLDE
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