ID X6NSS4_RETFI Unreviewed; 1677 AA.
AC X6NSS4;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=NB-ARC domain-containing protein {ECO:0000313|EMBL:ETO29051.1};
GN ORFNames=RFI_08074 {ECO:0000313|EMBL:ETO29051.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO29051.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO29051.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO29051.1}.
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DR EMBL; ASPP01006286; ETO29051.1; -; Genomic_DNA.
DR EnsemblProtists; ETO29051; ETO29051; RFI_08074.
DR OrthoDB; 24713at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 5.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22847:SF637; WD REPEAT DOMAIN 5; 1.
DR PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF00805; Pentapeptide; 1.
DR Pfam; PF00400; WD40; 12.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 3.
DR PROSITE; PS00678; WD_REPEATS_1; 7.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 12.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 568..725
FT /note="NACHT"
FT /evidence="ECO:0000259|Pfam:PF05729"
FT REPEAT 1084..1125
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1126..1167
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1168..1209
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1210..1251
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1252..1293
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1294..1335
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1336..1377
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1378..1419
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1420..1461
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1471..1503
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1504..1545
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1555..1586
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1587..1628
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1629..1670
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 1677 AA; 192503 MW; 2D9D7B2BCE306648 CRC64;
MQHESNQGKY AREIKVLKRL CGDAVDEETL KKQFEENNGN VALVIESILS KVMHQKFTVL
CLTKKKDNNQ KLNTMRFIIC YIEIRVNIPI CVHNCKILQK KKKIKKDEKT EVGEIKSGIN
LQGFCENIDC LAAKAKFPVW VNIGFGDISF VSDKTSYCCP DCKQPTVASI IKAMLFNSEH
RIYADDNSPP VMDNYYQAFY TIKHGLTYTM HATKIRQHAT NLQDLITRSE RAMESEEVKK
LVEELQKHLI TVVKPEKVKD QTRLLEKIRD ECQGDHNQVF DIGRFTILCD DAIKLQTAVA
VVKKAEQFRM VVSEDKDYFE KQSPTHYRFH KLKLYVPKHD VYVEMQATLK SYTTLKGYTI
IENPELSHLY YELVRAWKPQ NSEEEELKQA SYETLTKISD ITCEWIDGKG IQKIADRYRS
HSDIVVLKPP QLSKKSEIEI KNNASLKIAQ FMYEQLCKFT PEKIKGKALY AILYEYYKKY
IIGDKNPASC ADFALLLQES RKQEMEEDVT ILHDLETYIP LQANNYPHTD GDDRQKHDTF
DCHQHILEIL GIEEEEEKKS EQQQKKITII QGESGSGKSI FCRHLEETLW HNYILDSKQP
IPVYISFAKS YNKQNEKDLI LQALQARNIN KEIMDVIREK VSFVFIMDGF DEIFDKYNKS
DNEQYFYHRF NLDQWNAKII VTCRSNVLNE DDIKNALIIN QNNTSMMYLW PFTKQQMHSY
IEKFAKMQSK NNNNNNWTPQ QYEETLNNYP NLLKMVEEPF LLRLILTVMP SLIKQYGAGS
KISKAQVYDV FNEQWIDTRA QHIMSKLAEL RIQTNFNKLK STLKQYCLDL SFELLIQGSQ
VAIESTYLPE NDEIINIEDP KMENESKNNF NEKKMNTSDN SNVKIQDIWK KYFNGDSIAK
YVLRRGGNNK YQFLHKSCQE YYAAQKIISE ILSWKPNVAT IDNQQFQQQF QQHIHNLSIN
CKLLNKELGI IHFVAERIYD TNSLFINLKS RLFRIIEASK KNERISIAAA NAATILNSAN
INMHNRNWNN INIPNAILDY AFLEGTTFNN ANLNNVSFVQ ACLNKTNFTN ASMNDAYFGE
YAYLSGHSDR ICAVQFSPDG KKIVSCSDDD TIKMWDALSG KKIQTFEGHS SAVKIIQFSP
DGSKILSSSR DNTIRIWNAS SGRQIHVWKE HTNVISVAQF SPDGFKVVSS SWDNTVQIWD
VSSGKRIHLL DGHSSCVNGA QFSPDSSRVA SSSWDRTIRI WDVLSGKQIQ ILEGHTDYVN
GTQFTLDGSK IISHSKDKTI RVWDLSSGKQ LQILKGHSTF INGIQLSSDG SKILSFSYDK
TCRIWDLLSG KLLQVLEGHT DRVELARFSF DDSRVVTCSW DKTLRVWDVS SGKQIQVLEG
HSGIVRGMEY FPKSFKVLSY SDDKTIRIWD TTSERKIQLT ERNLDDVIDV RFSLDGSTII
SSSVDKAIQL WDVKSGRNIQ IFDNLSSDGG AIQISPDASK VVSYSSDDTI RIWDLLSGKQ
LQLFEGYAKE VSGVQFSSDS NKIGLFSKDE TIQIYDLSSK KQIQLLSGCS QTKEIQFSPD
NSKIVSCSFD HKIRVWDLLS GNILQVFEGH PLATNGILFS PNGSTIVSYS WDKTIRSWDI
ASGKQHLLLK EHSDNVTEVQ FSPDGTKLVS GSDDKTVRLW DFSSGKQLHV LKGIRVV
//
