KEGG   Verticillium alfalfae: VDBG_01446
Entry
VDBG_01446        CDS       T02227                                 
Name
(RefSeq) metallothionein-I gene transcription activator
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
val  Verticillium alfalfae
Pathway
val03020  RNA polymerase
val03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VDBG_01446
  09124 Replication and repair
   03420 Nucleotide excision repair
    VDBG_01446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_01446
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_01446
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VDBG_01446
  RNA polymerase III system
   RNA polymerase III
     VDBG_01446
  RNA polymerase I system
   RNA polymerase I
     VDBG_01446
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VDBG_01446
SSDB
Motif
Pfam: DNA_RNApol_7kD GATA DUF5816 Zn-ribbon_8 HypA TF_Zn_Ribbon
Other DBs
NCBI-GeneID: 9536458
NCBI-ProteinID: XP_003009763
UniProt: C9S887
AA seq 81 aa
MSREAYQVPTGQGSNPAATGKSFDAYGGGSSSEVGPQMQYLCGDCGLKFQMRRGDAIRCK
ECGCRILYKERTKRMVQFEAR
NT seq 246 nt   +upstreamnt  +downstreamnt
atgtctcgcgaagcctaccaggtccccacaggccagggttccaatcctgccgcaaccggc
aagtcctttgacgcctatggcggtggcagcagcagtgaggtcggccctcagatgcaatac
ctctgcggtgactgcggcctcaagttccagatgcgccgcggcgacgccattcgatgcaaa
gagtgcggctgccgcatcctgtacaaggagcgcaccaagcgcatggttcagttcgaggcg
aggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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