KEGG   Verticillium alfalfae: VDBG_03362
Entry
VDBG_03362        CDS       T02227                                 
Name
(RefSeq) DNA polymerase subunit delta-2
  KO
K02328  DNA polymerase delta subunit 2
Organism
val  Verticillium alfalfae
Pathway
val03030  DNA replication
val03410  Base excision repair
val03420  Nucleotide excision repair
val03430  Mismatch repair
val03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDBG_03362
   03410 Base excision repair
    VDBG_03362
   03420 Nucleotide excision repair
    VDBG_03362
   03430 Mismatch repair
    VDBG_03362
   03440 Homologous recombination
    VDBG_03362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_03362
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_03362
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    VDBG_03362
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      VDBG_03362
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     VDBG_03362
SSDB
Motif
Pfam: DNA_pol_D_N DNA_pol_E_B
Other DBs
NCBI-GeneID: 9533306
NCBI-ProteinID: XP_003007223
UniProt: C9SE06
AA seq 497 aa
MVTLDEATGLLQKKSDAETTQLARAPSIYKPLPTFVLKKDRSYQQQFADVYFLRLTHIKP
AVEKIAAEAWDGTVIGGEPAKQVNRVLDVRQGELCWVAGTIYMEMRLKPNILEDVSKDRW
ISAPVSTEKYYSEDDQDQVMIEDDSGRIRLVGDVLKTVNLVTGCVIAVMGSENANGELEV
IDIKFADISPQPERWDLTKPPSNGKQQVKDEDEEMKDAPTAEAGAERLPSCPSLDPSAQK
EASNISRLIIAGNSISLTEAPKLDPSATDKKPVTKKYGYDSSTYNPVPSQLLDDFLSELL
PSIPITLLPGAQDPANASYPQQPIHTAMFPKARPWSVNPDTNEAGWFDNTTNPWEGEIDG
WRVLGTGGQNVDDVFKYIDSEDRLGMMEAMCRWRCSAPTAPDTLCEFPPSDMACRDTIAD
AAAGSYPFQDDDPFVIKSAPHLYFVGCQPEFSTKVIQGPEGQQIRLITVPSFSETKELVL
VDTETLEVSKVRISTAT
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggtcacccttgatgaggccactggccttctccagaaaaagtcggatgcagagacgacg
cagctcgcaagagcaccttcaatctacaagcccctacccacgtttgtcttgaagaaggac
aggtcctaccagcaacaatttgccgacgtttacttccttcgccttacgcacatcaaacct
gccgtagaaaagatcgcagccgaagcctgggatggcaccgtcattggcggggagccggcg
aagcaggtcaatcgagtgctcgacgtccggcagggtgagctttgctgggtggctggtacc
atctacatggagatgcgattgaagcccaatattctcgaggatgtgtccaaagaccgctgg
atctcggcccccgtctcgactgagaaatactactccgaagatgaccaggaccaggtcatg
attgaggatgactcaggtcgcatcaggctcgtaggcgatgtcctcaagacggtcaacctc
gtcactggctgtgtcatcgctgtcatgggatctgaaaacgccaatggcgaactcgaagtc
attgatatcaagtttgccgacatctccccccagccagaacgctgggatcttaccaagcct
ccctccaatggcaagcaacaggtcaaggacgaagatgaagaaatgaaggatgccccaact
gccgaggccggcgcagaaagattgccatcgtgtccgtcactcgatccgtctgctcaaaaa
gaggcctcaaacatcagccgcctcatcattgccgggaactcaatatcactgaccgaggcg
ccgaagctggaccccagtgcgacggacaagaagcccgtcaccaagaaatatggctacgac
tcgtctacctacaaccccgtccccagccagctgctcgacgactttctctcggagcttctc
ccttccatacctatcactctgctgccgggcgcccaggatcctgccaacgcaagctatcct
cagcagccgatccacaccgccatgttccccaaagcgagaccctggtccgtcaatcctgac
acgaacgaggccgggtggtttgacaacacgaccaacccgtgggagggcgaaatcgacgga
tggagagtcctcggcactggcggccagaacgtggacgacgtcttcaagtacatcgacagc
gaagaccgtttgggcatgatggaggccatgtgcaggtggaggtgtagtgcacctactgct
cctgacaccctttgtgagttccctccctcagacatggcatgccgtgacacaattgctgac
gccgccgcagggagttacccctttcaagatgacgacccttttgtcatcaagtcggcacct
cacctctactttgtcggttgccagcccgagttctcgaccaaggtcattcaggggcccgaa
ggccagcagatccgcctcatcacggtgccctctttctcggaaacgaaggagcttgtgctg
gtcgatacggagacgcttgaggtgtccaaggtccgcatttcgacagctacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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