KEGG   Variovorax sp. PMC12: C4F17_05890
Entry
C4F17_05890       CDS       T05380                                 
Name
(GenBank) DNA ligase
  KO
K26441  DNA ligase [EC:6.5.1.1]
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    C4F17_05890
Enzymes [BR:vam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C4F17_05890
SSDB
Motif
Pfam: DNA_ligase_OB_2 DNA_ligase_A_M ParA
Other DBs
NCBI-ProteinID: AVQ80521
UniProt: A0A2P1V5U3
Position
1:1283574..1284416
AA seq 280 aa
MLNRRSLLLAAFGLVTAPAAFARAAAPSLMLADVYRPGMSLNDYWVSEKYDGVRGYWDGK
QLWTRGGERIAAPAWFTAALPAQPLDGELWAGRGRFAHAVATVRSQTPNDVAWHEMRFMV
FDLPNQPGDFTARLGALRKLLPITDAPWVVAVPQERATTHAELQSLLDKTVKMGGEGLML
HRGSSQYRGERNNDLLKVKPYEDAEARVVEHVPGKGRHAGRLGALLVETADGKRFKLGTG
LTDAERENPPAIGSWVTYRYNGTTTTGLPRFARFMRVREG
NT seq 843 nt   +upstreamnt  +downstreamnt
gtgctgaatcgacgctccctcctgcttgccgctttcggcctggttaccgcgcccgccgcg
ttcgcgcgcgcggcggcgccttcgctgatgctggccgacgtctaccgccccggcatgtcg
ctgaatgactactgggtgagcgagaagtacgacggcgtgcgcggctactgggacggcaag
caactctggactcgcggcggcgagcggatcgcggcgcccgcgtggttcacagccgcactg
cccgcgcagccgctcgacggcgaactgtgggcaggacgaggccgcttcgcgcacgccgtg
gcaacggtgcgcagccagacgcccaacgacgtcgcatggcacgagatgcgcttcatggtg
ttcgacctgcccaaccagcccggcgacttcacggcgaggctgggcgcactgcgcaagctg
ctgcccatcaccgacgcaccgtgggtcgtggccgttccgcaggagcgcgcgaccacgcat
gcagagctgcagtcgctgctcgacaagacggtgaagatgggtggcgaggggctgatgctc
caccgcggcagttcgcagtaccgtggcgagcgcaacaacgatctgctgaaggtcaagccc
tacgaagacgccgaggcccgcgtggtcgagcacgtgcccggcaaaggcaggcacgccggg
cggctgggcgcgctgctggtcgagacggccgacggcaagcgcttcaagctcggcaccggg
ttgaccgacgccgagcgtgagaatccgcccgccatcggcagctgggtgacctaccgctac
aacggcaccaccacgacgggcctgccccgctttgcccgcttcatgcgggtgcgcgaaggc
tag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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