KEGG   Vigna angularis (adzuki bean): 108320898
Entry
108320898         CDS       T04660                                 
Name
(RefSeq) probable RNA helicase SDE3
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
var  Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:var00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108320898
   03036 Chromosome and associated proteins [BR:var03036]
    108320898
Enzymes [BR:var01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     108320898
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108320898
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     108320898
SSDB
Motif
Pfam: AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 AAA_19 ResIII UvrD-helicase AAA_22 Mov-10_helical Helicase_RecD AAA_16 DEAD UvrD_C ATPase_2 AAA AAA_5
Other DBs
NCBI-GeneID: 108320898
NCBI-ProteinID: XP_017407981
UniProt: A0A0L9TB50
Position
Un
AA seq 907 aa
MSTAGWSDEERSVIGDTAEIGFLDFEEEKSVCSYFDYEGVPVVVSAPFPFVEGKPQSVFI
GDTAVDLITIRNTTDEPVDLWSVHIFASNPTDSFTLSLTEPLPENSNAEGEQSCLESFSL
EDRVLQPRENLKVWLSCKTKEIGMCSSVIYFDAGDEKIERVVFLLVEDKISKSLASKRPY
SRAKKKDKFVVDNYVPGSRPAGKPTRRYINRLPKYHIPRDMRELLENNQIPQVVEEGLTR
RTYSSYFKTLIIMEEIQLEEDMRIYDMESISMRKRNNRFLSMEVPGLAERRPSLVHGDYI
FVKLAYDNSNRQPYQGFIHRVEADEIYLKFDPEFHFYHKDENTYDVHFTYNRINMRRLYQ
AAEAAENLGTDILFPSTSIKRHIKTAALVPISGTFNEEQICSIKMILGCKGAPPYLIHGP
PGTGKTRTIVEAILQLYKYHKNARILVCAPSNSAADYILERLLTQQDIELRENEIFRLNA
STRPYEDVKPEIIRFCFFDDMVFKCPPVNALSYYKIIISTYMSASLLYAEDLARGHFSHI
FLDEAGQASEPETLIPVSHLCTMKTVVVLAGDQLQLGPVIYSKKADEFGLGVSYMERLSQ
LQLYASGDTNYVTRLIRNYRCHPAILHLPSKLFYYGELLACRDSTTFLTMGELLPNKEFP
ILFYGIQGCDEREGNNPSWFNRIEVSKVIELVSRLIAGGNIKEKNIGIITPYRQQVSKIK
QTLENLDMPDIKVGSVEQFQGQEMEVIIISTVRSTIKHNEFDRVHCLGFLSNYRRFNVAI
TRAISLLVIIGNPHIICKDDYWSQMLWYCVDNSSYQGCSLPERVEPYDDEDAEENPYSTE
DNAWPSNNAEWGQDSSNNAEWGQDSSNNAECGQDSSNNAEWGQDSSQIGLPKPVTNEAEW
SDGWRSN
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgagtactgccgggtggtcagatgaggaacgctctgtcattggagatacggctgaaatt
gggtttctagattttgaggaagagaaatctgtttgcagttactttgattatgaaggggtt
ccagttgttgtatctgccccatttccatttgtggaaggcaagcctcaatctgtatttata
ggggacactgctgtggatttaataaccattaggaatactactgatgaaccagtggacctg
tggagtgttcatatttttgcctcaaatcctacggacagtttcactctctctcttacagaa
cctctaccggaaaattcaaatgcagaaggagaacagagctgcttagaatctttctctttg
gaggacagggtgcttcaacctcgtgaaaacttgaaagtatggctgtcttgcaagacaaaa
gaaattggcatgtgttcatcagtcatatattttgatgctggagatgaaaaaattgaaagg
gtggttttcctcttagttgaagacaaaatctccaagtctttggcttctaagaggccctat
tcaagagcaaagaaaaaggacaaatttgttgtggataattatgttccaggttcacgtcct
gcagggaagccaactcgaagatacataaataggcttccgaaatatcacattcccagggac
atgagagagttgcttgagaataatcagatccctcaagttgttgaagaaggtcttactaga
aggacttattcatcttatttcaaaacattaataataatggaagagatccagttggaggaa
gacatgaggatttatgatatggaatctatatcgatgagaaagaggaacaatcgatttttg
tctatggaggttcctgggcttgctgagagaagaccatctctggttcatggggattatata
tttgttaagctcgcatatgataatagcaacagacagccttatcagggctttatccaccga
gttgaagctgatgaaatttatttgaagtttgatcctgaatttcacttttaccacaaggac
gaaaatacatatgatgttcacttcacctataacaggatcaatatgagaaggctatatcaa
gcagctgaggcagcagaaaacttgggtaccgacatcctctttccatctacatcaataaag
agacacattaaaactgctgctctagtacccatatctggtacttttaacgaggagcaaatt
tgttcaatcaaaatgattcttggttgcaaaggtgcaccaccttatttgattcatggaccc
cctggtacgggaaagacaaggacaatagtagaagcaatcctgcagctctacaaatatcac
aagaatgctcggattcttgtgtgtgcaccctcaaatagtgcagcagactacatactggag
agactccttactcaacaggacattgagttgcgagaaaatgaaatattcaggctcaatgca
tctactaggccatacgaagatgttaaacctgaaattatccgcttctgcttctttgatgat
atggtatttaagtgtcccccagtgaacgccctcagttattataagatcataatatccaca
tatatgagtgcgtctcttctttatgctgaagatcttgcccgtggtcacttttcccatatt
tttttggacgaggctggccaagcttctgaacctgaaaccttgatccctgtatcccacctc
tgcacaatgaaaactgttgttgttctggctggagaccaattgcaattgggtccagtaata
tattccaagaaagcagatgagtttggtttgggggtttcatatatggaacgattgtctcaa
ctccagctatatgccagtggagatactaactatgtaacacgattgattcggaactatcga
tgtcacccagcaatattgcatcttccttcaaagttgttctattatggggaattgcttgct
tgtagagattccacaactttcctgacgatgggggagttgctacctaataaggaatttcct
attcttttctatggcatccaaggatgcgatgaaagagaaggaaataacccatcgtggttt
aaccgcattgaagtcagtaaggttatagaacttgtcagtagactgattgcaggagggaac
ataaaggagaaaaacattggcataataactccatataggcaacaagtgtcaaaaataaaa
cagacacttgaaaatctagatatgcctgacatcaaagtgggtagtgtcgagcaattccaa
ggacaagagatggaggttattatcatatcaacagttcgatcaactatcaaacataacgag
tttgacagagtccactgtcttggctttttgagcaattatagaaggtttaacgtggctata
actcgtgctatatcattgctggttataattgggaatccgcatataatctgcaaggatgac
tattggagccaaatgttgtggtactgtgtggacaattcatcttaccagggttgttctctt
cctgagagggtggaaccttatgacgatgaagacgctgaagagaacccatactcgactgaa
gataatgcgtggccctcaaataacgcagaatggggtcaagattcatcaaacaatgcagaa
tggggtcaagattcatcaaacaatgcagaatgcggtcaagattcatcaaacaatgcagaa
tggggccaagattcttcccagatagggctccctaaacctgttaccaatgaagctgagtgg
tctgatggctggagaagtaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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