KEGG   Vigna angularis (adzuki bean): 108332007
Entry
108332007         CDS       T04660                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108332007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:var03021]
    108332007
   03036 Chromosome and associated proteins [BR:var03036]
    108332007
Transcription machinery [BR:var03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108332007
   Coactivators
    SAGA/TFTC/STAGA complex
     108332007
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108332007
    STAGA complex
     108332007
    TFTC complex
     108332007
    SAGA complex
     108332007
    SLIK complex
     108332007
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 Ge1_WD40 PROPPIN Nup160 WD40_like LisH PALB2_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 108332007
NCBI-ProteinID: XP_017422576
UniProt: A0A0L9UGP8
Position
4:complement(31756219..31765703)
AA seq 671 aa
MEDDKIVGYVTAYLKKRGFTQTEKIFQEEFRHNKTTNSSSSNSLLEPDIANHLLAFSQLE
SGPARFHDGYSKLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFR
EDHEMMHLRDLQKLEGVLSPTHLEEMEFAHSLRQSKFNIKICEYSYELLLQHLHSTQSTT
ILGIINEHINFQVSPGQPSLISDDPEAVTLTGSSQEAANRINQKEIHWGLLEDSLEERLE
KAGALLSDSEKGEGETKEGENDETKKRSIEGGKQGGSVKKVKKDKGGSTTGKSAKPEASA
VPAAPRVKPELPLPLMPTEVEQSILEDLRNRVQLSNVALPSVSFYTFINTHNSLSCSSIS
HDGSLIAGGFSDSSLKVWDMAKLGQPTASSLLQDENDTSPNDQMFGQGLGKRQYTLFQGH
SGPVYAASFSPVGDFILSSSADATIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFAS
SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECV
RVFVGHRGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSE
GSILASGSADSTVKLWDVNTSTKVSRAEEKSGNANRLRSLKTLATKSTPVYSLRFSRRNL
LFAAGALAKSG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggaggacgataaaatagttggatatgttaccgcgtatctgaagaagagaggtttcacg
caaaccgagaagattttccaggaagagtttcggcataacaaaaccaccaattcctcctcc
agtaattcccttctcgaacccgacattgccaaccacctcctcgcattctctcaattggag
agtggtccggctaggttccacgacggctacagcaaactgcgaacatggacttattcttca
ctggatttgtacaagcacgagttgcttcgcgtgctttatcccgtgtttatccactgcttt
atggacctcgtggcgaaaggacatgttcaggaagctcggaatttcttcaatactttccgt
gaagaccacgaaatgatgcacttgcgtgaccttcagaagttagaaggggttctttctcct
acccatctggaggaaatggaattcgctcactcgcttagacagagcaaattcaacataaag
atatgtgagtattcctatgagcttctcttgcaacatctacacagtactcaatccaccact
atactcggtattataaatgagcatattaactttcaagtttcccctggacaacctagctta
atttctgatgatccggaagctgttacccttactggaagcagccaggaagcagcaaaccgg
ataaatcaaaaagaaattcattgggggttacttgaagattctcttgaagaacggctagag
aaggcaggggctttgctttcagactcggaaaagggtgaaggggaaacaaaagaaggggag
aatgacgagactaagaaaagatccattgaaggaggaaagcaaggtggttcagtaaaaaaa
gtaaaaaaggacaagggtggtagcacaactggaaagagtgcaaaacctgaagctagtgct
gtacctgcagctcctcgagttaagcctgaactccccttacccttaatgccaactgaggtt
gaacagtccatccttgaagatttaaggaaccgtgtacagctcagcaatgttgcattgccg
tcagttagcttttacacatttataaatacacataacagtttaagctgttcatcgatatcc
catgacggatcattaattgctggaggattttctgactcatcactcaaggtttgggatatg
gcaaagcttggacaaccgactgccagttctcttttgcaggatgagaatgacacatcacca
aatgatcaaatgtttgggcaagggcttgggaaaagacagtatacactatttcaaggtcat
tcaggacctgtttatgcagcctcttttagtcccgtgggagattttatcctttcatcctca
gcagacgcaacaattcggttatggagcaccaaacttaatgccaatcttgtttgttataag
ggtcacaattaccctgtctgggatgttcagtttagtcctgtagggcattattttgccagc
tcttcacacgacagaactgctaggatttggtcaatggacaggatacagcccttaagaata
atggcaggacacttatctgatgttgattgtgtacaatggcatgccaactgcaactacatt
gcaactggttccagtgacaaaacagttcgactatgggatgtgcagagcggtgagtgtgtc
cgggtttttgttggtcacaggggtatgattttgtctttggcaatgtctcctgatggtcgc
tatatggcatctggggatgaagatggcacgatcatgatgtgggacctctctagtggtcgc
tgtctcacccctttgatcgggcacacgtcttgtgtctggtcccttgcattcagttctgaa
ggttcaattctagcatctggatctgctgattccactgtaaaattgtgggatgtaaatacg
agcaccaaggtttcaagggctgaagaaaaaagtgggaatgctaacagacttagatcgctg
aaaactctggcaaccaaatcaaccccagtttactcattgcggttttctcgaaggaatctt
ctttttgcggctggagctctagcaaaaagtgggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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