KEGG   Vigna angularis (adzuki bean): 108347576
Entry
108347576         CDS       T04660                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108347576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108347576
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108347576
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108347576
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 108347576
NCBI-ProteinID: XP_017442401
Position
11:complement(813685..816712)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEKEELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggccctgaggatatttacctttccacttcacttgccagctatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctcatgggaacacttcgctctttt
gatcaatttgccaatgcagttcttgagggtgcctgtgagagggttattgttggcgatctg
tactgtgacatccctttgggtctctatgtgatccgcggggaaaatgttgttctaattggt
gagctggacttggagaaggaggaacttcctgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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