KEGG   Veillonella atypica: B7L28_06035
Entry
B7L28_06035       CDS       T04798                                 
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
vat  Veillonella atypica
Brite
KEGG Orthology (KO) [BR:vat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vat03009]
    B7L28_06035
Enzymes [BR:vat01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     B7L28_06035
Ribosome biogenesis [BR:vat03009]
 Prokaryotic type
  ribosomal protein modification factors
   B7L28_06035
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TMF_TATA_bd NAGidase
Other DBs
NCBI-ProteinID: ARF99560
Position
complement(1326126..1327472)
AA seq 448 aa
MTKSLGYISLGCAKNLVDTEVMLGLLKDDGYTITDNLYEADLIIINTCTFIEKAKEESIN
TILEAAQYKETGRCKGLIVAGCLSQQYQDELFTEIPEIDALIGTGAWDQVMVAVDAIEHG
NRSCIMENITNIYDERMPRIQTTPRYSAYVKIAEGCNNGCTFCIIPKVRGAFRSRSIESI
KAEVERLAASGVKEIVLIAQDTTSYGIDLNNGKPLLTELLKELTKVEGIEWIRMLYLYPT
FFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDSREDIERLLKKIRNAPTHVTL
RTSIIVGFPGETDEQFQELCEFVKDIKFDNMGVFTYSQEEGTIAGAREDQIPEEVKEERY
HTLMSIQAAISEENNRDLEGTIDYAMIEELEEGDNDTVLAKGRLKSQAPDVDGNMYIEDC
GDKVKPGDIVQVQVEQGFAYDVVATIVE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgaccaaatcattgggatatattagcctaggttgtgctaaaaatttagtagatacagag
gttatgcttggattgttaaaggatgatggttataccattaccgataatttatatgaggct
gacttaattatcataaatacatgtacttttatagagaaagctaaggaagaatctatcaat
acgattcttgaagctgctcaatataaagaaactggtcgttgtaaaggcttaattgtagca
ggttgcttgagtcaacaataccaagatgagttgtttacagaaattcctgagattgatgcc
cttattggtactggtgcatgggatcaagttatggttgctgttgatgccattgagcatggt
aatcgtagctgcatcatggaaaatattactaatatctatgatgaacgaatgcctcgcatt
caaacgacgcctcgctacagtgcgtatgtaaaaattgcagaaggttgtaacaatggttgt
acattctgtatcattcctaaggtgcgtggtgcatttagaagtcgttccattgaatctatt
aaagctgaagttgaacgattagctgcgtcaggggttaaagaaatcgttctcattgcacaa
gatacgactagctacggcattgatttaaataatggtaaaccattacttacagagctgtta
aaagaattaactaaggttgagggaatcgagtggattcgcatgctctatttatatccaaca
ttctttagtgatgaattgcttgatattatcgtcaatgaaccgaagctttgcaaatatgtt
gatataccattacaacatgtaaacaacgatattcttaaacaaatgaatcgtcgtgattct
cgtgaggatattgagcgattattaaagaaaatccgcaatgcaccaactcatgttacattg
cgtacatcgattattgttggattccctggtgaaacagatgaacagttccaagaactttgt
gaatttgtgaaggatatcaagtttgataacatgggtgttttcacatattctcaagaggaa
ggaactattgcaggggctcgtgaagatcaaataccagaagaggttaaagaagaacgctat
catacattgatgtctatacaagctgctatttctgaagagaataaccgcgatttagaaggt
actattgactatgccatgattgaagaattagaagaaggcgataatgatactgttcttgca
aaaggtcgtttgaaatcacaagctccagatgtagatgggaacatgtatatcgaagactgt
ggcgataaggttaaacctggagatattgtacaggtacaagtagagcaaggttttgcttac
gatgtagtagctactatcgtagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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