KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_07600
Entry
IR04_07600        CDS       T03827                                 
Name
(GenBank) pseudouridine synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcf03016]
    IR04_07600
Enzymes [BR:vcf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     IR04_07600
Transfer RNA biogenesis [BR:vcf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    IR04_07600
 Prokaryotic type
    IR04_07600
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AJZ99020
Position
I:546865..547950
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSEVSDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVDGD
LALWDQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaggccaaa
ctcaaagcgctgccagaacacttccaagtcaatgaagtgttgggctactccttaacggga
cacggcgagcacttgatggtgcgtattcgtaagacaggggagaacaccagctttgtggcc
aatgaattagccaaagcctgtggcgtaccttcacgcgcggtgagctgggcgggtttaaaa
gacaggcatgccgttaccgagcagtggttgagtgtgcatctgccgaatggcgaaacgccg
gatttctctgcgtttctagcacaataccctagcattgaaattcttgaggtgactcgccac
gacaaaaagcttcgtccgggtgatttgcaaggcaatgaatttgtcgtcaccctatcggaa
gtaagcgatgttgcagcggtattaagccgtttagaaacggttgctgaattgggcgttccc
aattacttcggtagccagcgttttggacgtcatggcaataacctcagtgaggcgcgccgt
tgggggcgtgacaatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgagcagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgttgatggtgat
ttagccctttgggatcagcgtttgcaagctggagaagtagcgatttcagcggctttggcg
ggcgataatgccttgccgacttctggtcaagccttgccactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccgggggaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgccacttccttagtgcgtgaattgatcgaagagatc
ccagtggtgcgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system