KEGG   Vibrio cholerae O1 IEC224: O3Y_01105
Entry
O3Y_01105         CDS       T01766                                 
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
vci  Vibrio cholerae O1 IEC224
Pathway
vci00540  Lipopolysaccharide biosynthesis
vci01100  Metabolic pathways
vci01250  Biosynthesis of nucleotide sugars
Module
vci_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:vci00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    O3Y_01105 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:vci01005]
    O3Y_01105 (rfaD)
Enzymes [BR:vci01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     O3Y_01105 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:vci01005]
 Core region
  O3Y_01105 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 ThiF NAD_binding_10 KR Shikimate_DH Phage_T7_Capsid
Other DBs
NCBI-ProteinID: AFC57110
Position
I:complement(245154..246098)
AA seq 314 aa
MIIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMDRDDFLAQI
MAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQITGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLDHGVSGIFNC
GTGKAESFNEVAKAVIAFHGRGEVETIPFPDHLKGAYQEFTEADLTKLRAAGCDVQFKSV
AEGVAEYMALINRK
NT seq 945 nt   +upstreamnt  +downstreamnt
atgattatcgtaactggcggcgctggcatgattggcagcaacattatcaaagcgcttaat
gagcgcggtatcacagacattctggtcgtcgatcatttgaaaaatggtcgtaagttcaaa
aatctggttgacctacagatcgctgactacatggatcgagatgacttcctagctcagatc
atggccggtgatgattttgggttcattgacgccatttttcatgagggagcttgctctgcg
accacagagtgggatggcaaatatgtcatgctcaacaactatgaatactctaaagagctg
ctgcactactgtttagatcgtgaaatacccttcctgtatgcctcttcagcagccacttat
ggtgaaaccgatacctttattgaagaaccgcaatacgaaggtgcactcaacgtttacggc
tattcgaagcagcaatttgataactatgtacgccgcctatggctagatgcaaaacaacac
gacgaaaccctatcgcaaataacgggatttcgttacttcaacgtatacggccctcgtgag
cagcataaaggctcgatggcttcggttgcctttcatttgaacaatcaaatgaacgcgggt
gaaaatccaaaattgtttgctggcagcgagaacttcaaacgtgatttcgtttatgtcggc
gatgtcgctgcggtcaatttgtggtttttagatcatggcgtatccggcatatttaactgt
ggtactggtaaagcggaatcgttcaacgaagtggcgaaagcggtgatcgcattccatggt
cgcggcgaagtcgaaaccattccattcccagaccatcttaaaggtgcttaccaagagttc
actgaggctgaccttaccaaacttcgcgctgctggctgtgatgtacagttcaagagcgtg
gctgaaggtgtcgctgaatatatggcgctgattaatcgtaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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