KEGG   Vibrio cholerae O1 MJ-1236: VCD_001963
Entry
VCD_001963        CDS       T00903                                 
Name
(GenBank) carbamoyl-phosphate synthase large chain
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj00240  Pyrimidine metabolism
vcj00250  Alanine, aspartate and glutamate metabolism
vcj01100  Metabolic pathways
vcj01240  Biosynthesis of cofactors
Module
vcj_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    VCD_001963
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    VCD_001963
Enzymes [BR:vcj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     VCD_001963
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS ATP-grasp ATP-grasp_3 Dala_Dala_lig_C ATPgrasp_Ter ATP-grasp_4 CoA_binding_2 GSH-S_ATP
Other DBs
NCBI-ProteinID: ACQ60132
Position
1:1037387..1040617
AA seq 1076 aa
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDA
LTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG
FAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKSDT
AYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQ
AIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASVTSVQELHARVKANQA
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgccaaaacgtactgacattcaaagcatccttatccttggtgcgggtccaattgttatc
ggtcaggcttgtgagtttgactactcaggcgcgcaagcgtgtaaagccctgcgcgaagag
ggttaccgcgttattctggttaactcaaacccagcgaccatcatgactgacccagaaatg
gccgatgcgacttacatcgagcctatccactgggaagtggtgcgtaagatcatcgaaaaa
gagcgcccagatgcgattttgcccaccatgggcggccagactgcgctgaactgtgcgctg
gcactcgaaaaacatggcgtattggctgagtttggcgttgagatgatcggcgcaaccgcc
gatgcgattgataaagcggaagaccgctcacgctttgataaagcgatgaaatcaatcggc
ctagagtgtcctcgcgctgataccgcaaaaagcatggaagaagcgtacaaagtcctcgat
atggttggcttcccatgtatcatccgtccttctttcaccatgggcggcagcggtggtggt
atcgcttacaaccgtgaagagtttgaagaaatctgtactcgcggtctggatctttcaccg
accaatgaactgctgatcgatgaatcactgattggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgataactgcatcatcgtctgtgcgattgaaaacttcgacccaatg
ggcatccacacgggtgactcgatcactgtcgctccagcgcaaacgctaactgacaaagaa
taccaaatcatgcgtaacgcctctttggcggtactgcgtgaaatcggcgtagaaaccggc
ggttcaaacgttcagtttggtatcaacccgaaagatggccgcatggtgatcatcgagatg
aatccacgtgtatcgcgctcttctgcgttggcttcaaaagccaccggtttcccaattgcg
aaagtggcggccaaactggcagtgggtttcactctggatgagttgatgaacgacatcaca
ggcggcgcaacaccagcctcgttcgaaccgaccatcgactacgtggtcactaagatccct
cgtttcaacttcgaaaaattcgccggtgccaatgaccgtctgactacacaaatgaagtca
gtaggtgaggtgatggcgattggtcgtaaccaacaagaatcactgcaaaaagcactgcgc
ggcttggaagtgggtgcggctggtctggatgagaaagtggatctggacgcgccagacgct
ctgaccaaaattcgttatgagctgaaagaagcaggcgcagagcgtatttggtacatcgcg
gatgcattccgtgccggtatgtcagtggatggggtatttaacctgaccaacatcgatcgc
tggttcctagtgcaaattgaagaactggtgaagctggaagccgaagtgaaagccggtggc
tttgcgggcttgaaccaagacgtactgcgtaagatgaagcgcaaaggcttctctgatgcg
cgtttgtcaaaactgctcggcgtgagcgaaaacgaaatccgtcgtctgcgtgaccaatac
aacatccacccagtttacaagcgtgtggatacctgcgcggcagaatttaagtcagatacg
gcttacatgtactccacgtatgatgaagagtgtgaagccaatccgactgacaaagacaag
atcatggtgctgggcggtggtccaaaccgtatcggtcaaggtatcgagtttgactactgc
tgtgtacacgccgcgcttgcactgcgtgaagatggttacgaaaccatcatggttaactgt
aacccagaaaccgtatcaaccgattacgacacctcagatcgcctctactttgagcctgta
actctagaggatgtgctggctatcgtgcgtgttgagaagccaaaaggcgtgatcgtgcag
tacggcggtcaaacaccactgaaactggcgcgagcgctggaagcggctggcgtacctgtg
attggtaccagcccagatgcgattgaccgcgctgaagaccgtgaacgtttccaacaagcg
gtacagcgtttaggcctcaaacagccagacaacgcaaccgtaaccgctatcgagcaagcg
attgagaagtcgcgtgaaatcggtttcccactcgtagttcgcccctcttatgttctgggt
ggccgtgcgatggagattgtgtacgatgagcaagatctgcgtcgttacttcaacgaagcg
gtgagcgtgtcgaatgaatcaccagttctgctggatcgcttccttgatgatgcaaccgaa
gtggacgtggatgcgatttgtgacggtgagcgcgtggtgattggcggcatcatggagcac
attgaacaagcgggtgttcactcaggtgactcagcctgttctctgccggcttacaccttg
agccaagaaatccaagacaagatgcgtgagcaagttgagaagttggcatttgaactcggt
gttcgtggcctgatgaacattcagtttgcagtcaaagacaacgaagtttacctgattgaa
gtaaacccacgtgctgcgcgtactgtgccgtttgtttctaaagcaaccggtgctccgctg
gcgaaaatcgcggcgcgcgtgatggttggacaaactctggagcaacaaggcttcaccaaa
gagatcattccaccttactactcagttaaagaagtggttctgccgttcaacaagttcccg
ggggttgacccactgcttggccctgaaatgcgctcaaccggtgaagtgatgggtgtgggt
gccacgtttgctgaagcctatgctaaagcagagttgggctgtggctcggtttaccctgaa
ggtggtcgtgcgctactttcggtgcgtgaaggtgacaaacagcgtgtagtggatctggct
tctaagctagtgaaactgggttaccagttggatgcgactcacggtactgcagtgattctg
ggcgaagcgggcatcaacccacgtctggttaacaaagtgcatgaaggtcgtccacacatt
ctggatcgcatcaaaaaccacgagtacacctacattgtgaacacggcttctggccgccaa
gcaattgaagactcaaaagtactgcgccgtggtgcattggctcacaaagtgaactacacc
accacactgaacgccgccttcgcaacttgtatgtcacacacggcggatgccaaagcatcc
gtcacttcagtacaagagctgcatgcgcgtgtaaaagcgaaccaagcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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