KEGG   Vibrio cholerae O1 LMA3984-4: VCLMA_A0856
Entry
VCLMA_A0856       CDS       T01871                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
vcl  Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:vcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcl03016]
    VCLMA_A0856
Enzymes [BR:vcl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     VCLMA_A0856
Transfer RNA biogenesis [BR:vcl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VCLMA_A0856
 Prokaryotic type
    VCLMA_A0856
SSDB
Motif
Pfam: PseudoU_synth_1 RTC_insert
Other DBs
NCBI-ProteinID: AEA78124
Position
I:972700..973494
AA seq 264 aa
MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV
VHFDTSAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP
GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY
VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS
VDYPAHFGLPEMPIGPLFLPDNLN
NT seq 795 nt   +upstreamnt  +downstreamnt
atgagaatcgcgttaggtattgagtatgacgggactcactactacggttggcagcgccag
agagaagtcaaaagtgtccaagaagcgttagaaaaggcgctgagtaagattgccaaccat
ccagtggaagtgcagtgtgctgggcgaaccgatgcgggggtacatggtactggacaagtg
gtgcactttgataccagcgccgaacggcagatggtcgcttggaccatgggagccaacgcg
aatttgccgaaggacattgcagtacgctgggcgatggcggttcctgatgaatttcatgca
cgattcagtgccaccgcacgccgttatcgttatgtcatttacaaccatgtttatcgcccg
gggattttgaattctggcgtcagccattaccatggcgaactggatgttgaaaaaatgcag
caagcagggcagtacttgctgggggaaaatgatttcacctcatttcgtgcggtgcattgt
cagtcccgtagtccttggcgtaatgtcatgcatctgaatgtgacgcgtcacggtcgttat
gtggtgattgatattaaagccaatgcgttcgtgcatcatatggtacgcaatatcacgggt
agcttgatagccgtcgggcgtggtgagcagaagccagagtggattcaatggttattagca
caaaaagatcgcaccttagcggcggcgacggccaaagcggaagggctctacttggtttct
gtcgattaccctgcgcattttgggttgcccgaaatgccaattgggccacttttcttgcct
gataatttgaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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