KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_31081
Entry
VOLCADRAFT_31081  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14805  ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_31081
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VOLCADRAFT_31081
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    VOLCADRAFT_31081
SSDB
Motif
Pfam: DEAD Helicase_C Helicase_C_2 Lin-8
Other DBs
NCBI-GeneID: 9619547
NCBI-ProteinID: XP_002956383
JGI: 31081
UniProt: D8UCP4
Position
Unknown
AA seq 495 aa
LSAWAEFELHPDVLAGLAACGFTSPTPIQRECLHPAIRARVDIIGAAQTGSGKTLAFGLP
IMHKLAAERAAAAAADMDMEAGSMEEEGQGEEGGTSGGVAKEELEEEEEAGMEKHARRQS
QRQQQQRQQKAQRLQLQREKRGVVETPKQRGKQLQRQVPMGPAPQPGPLRALILTPTREL
ALQVCSHLQVIGRVCGVRVAAIVGGISDVKQARLLAARPAVLVATPGRLWDLIPPSTDRH
GPRAAAHLADLTHLSFLVLDEADRMVAQGHYKQQQQQQQRGKKHLLQTFVFSATLTLPLF
LKKRLRRGGGGAGGGAATLESLMDRVPFRTSPPPRVVDLTPQRRLADRVAEAAVNCLDTE
RDEVLYYLLAVHPGRTLVFANAVSAIRRVAALLKALGLPALALHAQQQQRQRLKALDRFR
SQPQSVLVATDVAARGLDIPGVTTVVHYQLPASADTYIHRCGRTARGLEGDGISIALVSP
AEAARFAGLGRVLGR
NT seq 1485 nt   +upstreamnt  +downstreamnt
ctcagcgcctgggcggagttcgagctgcatcccgacgtgctcgcgggcctggcggcgtgt
ggctttacctccccgacccccatccagcgggagtgcctgcacccggccatccgcgcccgt
gtcgatatcatcggcgctgctcaaacgggctcgggcaagacgctggcgtttgggctgccc
atcatgcacaagctggcggcggagcgggctgccgctgcggccgcggacatggacatggag
gcggggtcgatggaggaggagggacaaggggaggaaggggggacctcagggggggtagct
aaggaggagcttgaggaggaggaggaggcggggatggagaagcatgcgcggcggcagagc
cagcggcagcagcagcagcggcagcagaaggcgcagcgactgcagcttcagagggagaag
cgtggagtggtggaaacccctaagcagcgggggaagcagctgcagcgccaggtgccgatg
ggccctgcgccgcaacccgggccgctgcgggcgctgatcctgacacccacacgcgagctc
gcgttgcaggtgtgcagccacctccaggtgatcggtcgcgtctgcggggtacgagtggcg
gccattgtcggaggtatcagtgacgtcaagcaggcacggctgctggcggcacgacctgcc
gtactggtggccacaccagggcgactctgggacctcatacccccctccacagaccgccac
gggccccgggccgccgcccacctcgccgacctcactcacctctccttcctcgtcctggac
gaggcggacagaatggtggcgcaggggcactacaagcagcagcagcagcagcagcagcgc
ggcaagaagcatctgctgcagacctttgtgttttcggcgacactgacgttaccgctcttc
ctcaagaagcgtctccgtcgcggcggcggcggcgccggcggcggcgccgccaccctggag
tcgcttatggaccgggttcctttccgtacatcgccgccgccccgggtggtggacctgact
ccgcagcggcggctggcagaccgagtagcggaggcggcggtgaactgcctggacacggag
cgcgacgaggttttgtactacctcctggccgtacatcccggccgtacacttgtgtttgcg
aatgccgtgtctgccattcgccgagttgcagcgctcctgaaggcgcttgggctgccggcg
ctggcgttgcatgcccagcagcagcagcggcaacggctgaaggctctggaccgattccgt
tcacagccgcaatccgtactggtggctactgacgtggcggccagaggtctggacatcccg
ggagtgacgactgtcgtacactaccagctgcccgcgtcagccgacacgtacatccacaga
tgtggtcgtacagcccgcggtttggaaggtgacggcatctccatcgccctggtgtcgccc
gcggaggcggcccggttcgcagggctgggcagagtgctgggcagg

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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