KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_61462
Entry
VOLCADRAFT_61462  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03082  ATP-dependent chromatin remodeling
vcn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_61462
   03083 Polycomb repressive complex
    VOLCADRAFT_61462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_61462
Enzymes [BR:vcn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     VOLCADRAFT_61462
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     VOLCADRAFT_61462
   HDAC complexes
    Sin3A-HDAC complex
     VOLCADRAFT_61462
    BRAF-HDAC complex
     VOLCADRAFT_61462
    REST complex
     VOLCADRAFT_61462
    SHIP complex
     VOLCADRAFT_61462
    MiDAC complex
     VOLCADRAFT_61462
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     VOLCADRAFT_61462
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    VOLCADRAFT_61462
  Chromatin remodeling factors
   NuRD complex
    VOLCADRAFT_61462
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 9615650
NCBI-ProteinID: XP_002951644
JGI: 61462
UniProt: D8TYU9
Position
Unknown
AA seq 395 aa
MKAAGGVSAAAAAQSALAPAGPDAGTAPPIPATAAGTAAAARTAPVQPSQTQQQQSYPTP
RTRIYYNPELSMFSLGEDHPMVPHRLHLTHRLAELWGLFDDPAVQVVRDYPPATTDQLRR
FHTDEYIAFLEYLDTLDLETMSDEDDDDDEGGDCPIFPGLLRYVGLQAAGSILAARDLAH
GLCDVAVHWGGGMHHGMPYRAFGFCYVNDLVLAILELMAVCGRVLYIGEVEGIFRATNDT
LNHGKPQRPVFFPGTGKKNDLGEGTGKYYTVNVPLQDDITDDSYFHVYKAVVKTAFERFK
PQAVVLQCGCDSVAGDKLGRFNLSIRGHSRQVEWGFGAWRVPLLVTGGGGYTPPLVARCW
TLETAVLLGMQLGEAMPPAVAKAEDLADLGPSYFK
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaaagcagcaggaggtgtcagcgctgcagcggccgcgcagtcggccctggcacccgcc
gggccagacgcagggacagcacctcctatacccgcgacggctgcagggaccgcagcagcc
gcacgcaccgcgccagtccaaccttcgcaaactcaacaacagcagagctaccccactcct
cgcacacgcatctactacaaccctgagctgtccatgttcagcctaggggaagaccacccc
atggtcccgcaccgcctgcatctgacccatcgtctggcggagctgtggggcctgtttgac
gaccccgctgttcaagtcgtgcgcgattaccctccggccacaaccgaccagttgcgccgg
tttcacaccgacgaatacatcgccttcctagagtacttggacaccttggacttggagacc
atgtcagacgaggacgatgatgacgatgaggggggcgactgtcccattttccctggacta
cttagatacgtggggttacaggctgcgggcagtatccttgccgcacgcgacctggcgcat
gggctgtgcgatgttgccgtacactggggcggcggcatgcatcacggcatgccgtacagg
gcgtttggattctgttacgtcaacgacctcgtactggccattttggagctcatggcggtt
tgtggccgagtgctgtatattggtgaggttgaggggatttttagggccaccaacgacact
ctcaaccacggcaagccccagcgcccggtgttcttccccggcactggcaagaagaacgac
ctgggggaggggactggaaagtactacacggtcaatgtaccgctgcaggacgacattacg
gatgactcgtacttccacgtgtacaaggcggttgtgaagacggcatttgaacggttcaag
ccgcaggcggttgtgttgcagtgcggctgtgacagcgtggccggggataagttggggagg
tttaacctctccattagaggacactccaggcaagtggaatggggtttcggagcgtggcgc
gtacccctgctggtgactggagggggcggatacacaccgccgctggtggccaggtgttgg
actctggagaccgccgtgttgctcggcatgcagctgggggaggccatgccccccgcggtg
gcgaaggcggaggacctggcggacctgggcccctcgtacttcaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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