KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_62055
Entry
VOLCADRAFT_62055  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03167  DNA topoisomerase VI subunit B [EC:5.6.2.2]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_62055
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VOLCADRAFT_62055
DNA replication proteins [BR:vcn03032]
 Prokaryotic type
  DNA Topoisomerases
   VOLCADRAFT_62055
SSDB
Motif
Pfam: Topo-VIb_trans HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 9628388
NCBI-ProteinID: XP_002952053
JGI: 62055
UniProt: D8U0E2
Position
Unknown
AA seq 675 aa
MPPKPKADVLVQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENALDAAESISELPYIE
ITIEEVSKARLNRIRGVEEHGRLDEQLYQDFESEDAKKKRLAKEARDKERLQKLIEKKKE
LAAAGAAAKPGAGMRGNLFYKVTVKDNGAGMPHRDIPNMLGRVLSGTKYGVKQTRGKFGL
GAKMALIWSKMTTGLPFEISSARKGCGTRSHYVLDIDIHRHVRACIPNVHLEEQLPNPDH
WHGSCLSLTIEGNWQYYRSKIVRYLRQIAVITPYAHFCFSYKAEDDKNSMRINFRRRTDV
MPPPPRATKHHPSSVDLELVKRLIAATDTKTLTSFLKKEFDCVRPALAERLAGEMQAGVE
GDTNPKHLTDKQVVRLHQLLHEVRFDDPKGDHLSPAGEYNLRLGVMKELNPDMIATHQGD
VRVFEGHAFIVEAAVSVGGRDIKPGINVHRFANRIPLLFEGGSDVITKTALKRINWASYK
INQSTDKVGVFVSIVSTKIPFKGAGKEYIGDDVEEMVAAVKAAIQACCVQLKAKIVRAIA
AREQKQRKRNLTKYIPDVANAVYAKEDEEREAKRRRLEVADERHLLPAVVSHELTTATLQ
ARLTEYVERIDTDMALEYQVQQGLAAGVAKVRVRCGRGEKEAAQRGMRGEALVVLALSVY
VYVSSSHGIRVVDSS
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgccgccgaagcccaaggcggacgtattggtacagaagtctccggcggagtttttcgcg
gagaataagaatatcgcggggttcgataaccctggcaaatgcctgtacactaccgttcgc
gagctggtggagaatgcactggatgccgccgagtccatcagtgagctcccgtacatcgaa
attacgatcgaggaggtgtccaaggctcgactgaaccgtattcggggggtggaggaacat
ggccgactggacgagcagctttatcaggactttgagagcgaggacgcgaaaaagaagcga
ttagccaaggaggcccgggacaaggagcgcctgcagaagctcattgagaagaagaaagag
ctggcggcggcgggggcggctgccaagccgggagctggcatgcgggggaacctgttttac
aaggtcacggtcaaggacaacggcgcgggtatgccccaccgggacatccccaacatgctc
ggccgggtgctgtccggcaccaagtacggcgtcaagcagacacgtggcaagttcggtctg
ggcgccaagatggcgctcatctggtccaagatgaccaccggactgcccttcgagatcagc
agcgcgaggaagggctgcgggaccaggagccactacgtgctggacattgacattcacagg
cacgtacgtgcgtgtattcccaatgtgcatcttgaagagcagctgcccaacccggaccat
tggcatggctcgtgcctcagtctcaccattgaggggaattggcagtactaccggtccaaa
atcgtacggtacctgcggcagatcgccgttatcacgccatacgcacatttttgcttctcg
tacaaggcggaggacgacaagaacagcatgcggatcaacttcaggcggcgcaccgacgtg
atgccccctcccccccgtgccaccaagcaccacccttcctccgtggacttggagctggtg
aagcggctgattgccgccacggacaccaagacactgaccagcttcctcaagaaggagttc
gactgcgtgaggccggcactggcagagcggctggcgggggagatgcaggcgggggtggag
ggtgacacgaacccgaaacacctgacagacaagcaggtggttcgtcttcaccagctgctt
cacgaagttcgtttcgatgaccccaagggggaccacctaagtcccgcgggcgagtacaac
ctccgtctgggggtcatgaaggagctcaaccccgacatgatcgccacccatcagggggat
gtgcgggtgtttgagggacatgccttcatcgtggaggcggcggtcagtgtggggggcaga
gacatcaagccgggcattaacgtgcaccgtttcgccaaccgaattccgttactgtttgag
ggcggctctgacgtcatcaccaaaaccgccctcaaaagaatcaactgggcgagctacaaa
ataaaccagtccacggacaaggtgggtgtgtttgtgagcatcgtgagcaccaagatcccc
ttcaagggcgccgggaaggagtacatcggggacgacgtggaggagatggtggcggcagtt
aaggcggcaatccaggcgtgttgtgtgcagctcaaggctaagatcgtccgcgccatcgcc
gcccgggaacagaagcagcgcaaacgcaacctcacgaagtacatccccgacgtcgcgaac
gcggtttacgcgaaggaggatgaggagagagaggcgaagcggcggcgtttggaggtggcg
gatgaacggcatctgcttcccgcggttgtcagccatgagctgactactgcgacgctgcag
gcccgactgaccgaatacgtggagcggatcgacacagacatggcgctcgagtaccaggta
cagcaaggcctagcggcgggcgtagctaaggtgcgagtgcggtgcggaagaggggagaaa
gaagcggctcaacgtggtatgaggggagaagcccttgtggttctagccttgagtgtatat
gtatacgtttccagctcacacgggattcgtgttgttgatagctcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

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