KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_77526
Entry
VOLCADRAFT_77526  CDS       T01330                                 
Symbol
tubA1
Name
(RefSeq) alpha tubulin
  KO
K07374  tubulin alpha
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04145  Phagosome
vcn04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    VOLCADRAFT_77526 (tubA1)
  09142 Cell motility
   04814 Motor proteins
    VOLCADRAFT_77526 (tubA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_77526 (tubA1)
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_77526 (tubA1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vcn04812]
    VOLCADRAFT_77526 (tubA1)
   04147 Exosome [BR:vcn04147]
    VOLCADRAFT_77526 (tubA1)
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VOLCADRAFT_77526 (tubA1)
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     VOLCADRAFT_77526 (tubA1)
Cytoskeleton proteins [BR:vcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    VOLCADRAFT_77526 (tubA1)
Exosome [BR:vcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VOLCADRAFT_77526 (tubA1)
  Exosomal proteins of other body fluids (saliva and urine)
   VOLCADRAFT_77526 (tubA1)
  Exosomal proteins of colorectal cancer cells
   VOLCADRAFT_77526 (tubA1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 9626710
NCBI-ProteinID: XP_002957217
JGI: 77526
UniProt: P11481 D8TXF3
Position
Unknown
AA seq 451 aa
MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK
HVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPAS
MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDFEEVGAESAEGAGEGEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaggtcatctccatccacatcggccaggccggcatccaggtgggcaatgcctgc
tgggagctttactgccttgagcacggcatccagccggatggccagatgccttcggacaag
acgattggcggtggcgacgatgccttcaacactttcttctctgagaccggtgctggcaag
catgttccacgctgcattttcctggaccttgagccaactgttgtggacgaggtccgcact
ggtacttatcgccagctgttccatcccgagcaactgatatctggcaaggaggatgccgcc
aacaacttcgcgcgcggccactacaccattggcaaggaaattgtggatctggccctggac
cgcatccgcaagctggcggacaactgtaccggtcttcagggcttcctcgtattcaatgcc
gtgggtggtggcaccggctctggccttggctccctgctgctggagcgcctgtccgtcgac
tacggcaagaagtccaagctcggcttcaccgtgtacccgtcgccccaagtgtcgacggct
gtcgttgagccgtacaactccgtgctttcaactcactcgctgctggagcacacggatgtt
gccgtcatgcttgacaatgaggccatctatgatatctgccgtcgcagcctagacatcgag
cgcccgacctacaccaacctgaaccgtctgattgctcaggtcatcagttcgctgacggct
tctctgcgcttcgatggtgcccttaacgtcgatgtcactgagttccagaccaacttggtg
ccctaccctcgcattcactttatgctcagctcgtacgctcctatcatttccgccgagaag
gcttaccatgagcagctctcggttgctgagattaccaacgctgcgtttgagccagcatct
atgatggtgaagtgcgacccacgccacggcaagtacatggcctgctgtctgatgtaccgt
ggcgacgtggtgcccaaggatgtgaacgccgctgtggccacaatcaagacgaagcgcact
atccaattcgtggactggtgcccaaccggcttcaagtgcggtatcaactaccagccgcct
accgttgtgccgggtggtgatctggccaaagtgcagcgcgcagtgtgcatgatttcaaat
agcactgccatcggcgagatcttcagtcgcctcgaccacaagtttgatttgatgtacgcc
aagcgtgccttcgtgcactggtacgtcggtgagggtatggaggagggtgagttctccgag
gcccgcgaggatttggctgctcttgagaaggacttcgaggaggtcggcgccgagtccgcc
gagggtgctggtgagggcgagggcgaggagtactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2321)   
   KEGG ORTHOLOGY (1)   
   RefGene (2315)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (2337)   

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