KEGG   Vibrio cholerae O1 O395: VC0395_A0846
Entry
VC0395_A0846      CDS       T00520                                 
Symbol
himA
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
vco  Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vco03032]
    VC0395_A0846 (himA)
   03036 Chromosome and associated proteins [BR:vco03036]
    VC0395_A0846 (himA)
   03400 DNA repair and recombination proteins [BR:vco03400]
    VC0395_A0846 (himA)
DNA replication proteins [BR:vco03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VC0395_A0846 (himA)
Chromosome and associated proteins [BR:vco03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    VC0395_A0846 (himA)
DNA repair and recombination proteins [BR:vco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      VC0395_A0846 (himA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: ABQ19858
UniProt: A5F1W7
Position
2:858746..859042
AA seq 98 aa
MALTKAELAEALFEQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNER
PGRNPKTGEDIPITARRVVTFRPGQKLKARVENIKVEK
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgctcacaaaggccgaattggctgaagccctgttcgaacagctcggcatgagcaag
cgggatgccaaggatacggttgaggtgttttttgaagaaattcgtaaagcactcgaaagt
ggcgaacaggtaaaactctccggttttggtaattttgacctacgagataaaaatgaacgt
ccgggtcgaaaccctaaaaccggtgaagatattcctattaccgctcgacgtgtcgtaacg
ttccgcccagggcaaaaattgaaagcccgtgtcgagaacatcaaagtcgaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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