KEGG T02099: VC395

Vibrio cholerae O1 O395: VC395_1033

Entry

VC395_1033        CDS       T02099

Symbol

uvrB

Name

(GenBank) excinuclease ABC subunit B

K03702

excinuclease ABC subunit B

Organism

vcr Vibrio cholerae O1 O395

Pathway

vcr03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:vcr00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VC395_1033 (uvrB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcr03400]
    VC395_1033 (uvrB)
DNA repair and recombination proteins [BR:vcr03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VC395_1033 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      VC395_1033 (uvrB)

SSDB

Motif

Pfam:

UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 UvrD-helicase eIF3_p135

Other DBs

NCBI-ProteinID:

ACP09045

Position

I:1109942..1111972

AA seq 676 aa
MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT
IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ
YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA
RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE
TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL
DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM
GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL
GDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQ
KRDEIHQLRQQFIANS

NT seq 2031 nt +upstreamnt +downstreamnt
atgagcaaagcatttgaattggtttcagactatcaacctgctggtgatcagcctaccgcg
attaagcaattgctggaggggttggaagcgggcttggctcatcaaactctgcttggggta
acgggttcaggtaaaacctttacgttagcgaatgtgattgccaccgcgcagcgtcccacc
attatacttgcgcctaataagacactggcggctcaattgtacggcgaaatgaaagccttt
tttcccaacaatgcggtggagtatttcgtttcttactacgactactatcaaccagaagcc
tatgtgccgaccacggatacttttattgaaaaagacgcgtccgtgaacgctcatattgaa
cagatgcgcttatcggccactaaagccttgcttgagcgcaaagatgcggtgattgtcgct
tcagtttctgccatatacggtctgggcgatccggactcttatctaaaaatgatgctccat
ttacgtcgtggtgatgtgattaatcaacgtgacatgttgcgtcgtttggcggagctgcaa
tattcacgcaatgatatggcatttgagcgcggtcagttccgggtacgcggagaagtgatt
gatattttccctgccgaatcggatcaagaagctgttcgagtggaaatgtttgatgatgaa
atcgaatgcatcagtttatttgatccgctgaccggcgtgattacgtcacgcgatttagct
cgctttacgatttaccccaaaactcactatgtcaccccacgcgagcgcattcttgaggcg
atagagcagattaagagcgagttgcaggtccgccgccaatatttgctggataacaataaa
ttgctggaagagcagcggatttctcagcgaactcagtttgatattgagatgatgaacgaa
ttgggattctgctcagggatcgaaaactactcacgttacctaagtggtcgtgcagaaggc
gagccgcctccaacgctctttgattacttgcctcacgatggcttgctgatcatcgatgaa
tcacacgtcaccgtgccgcaaattggcgcgatgtttaaaggcgatcgttcacgaaaagaa
acgctggtggagttcggttttcgcctaccttcagccttagataaccgcccacttaagttt
gatgaatttgaagcattagcaccgcaaaccatctttgtgtcagcaacaccgagtgaatat
gagctcactaaatcgggtggtgaagtggcggagcaggtggtgcgtccaaccggtttgtta
gacccgatcattgaagtacgtccggtcgccactcaggtggatgatctgctttctgaagcg
cgcattcgcgcggccaatgatgagcggattttggtgactaccttaaccaaacgcatggcc
gaggacttaaccgaatatctgcatgagcatggtgtgaaagttcgctatttacactcggac
attgataccgtcgaacgggtagaaattattcgtgatttacgattaggcgtatttgatgtg
ttggtggggatcaacttgctacgtgaaggtctggacatgccagaggtcgctttagtggcg
attttggatgctgataaagaaggctttttgcgttccgagcgttcacttatccagaccatg
ggtcgtgcagcacgtaacgtgaatggtaaagcaattttgtatgccgactcgatcaccaaa
tccatgcgtaaagcgatcgatgaaaccgagcgtcgccgtgagaagcagctggcttataat
gagcagcgcggtatcacgccgcagcctttaaaacgcagcgttaaagacatcatggagctg
ggcgatattgcgaaatcgcgcaaacagaagaacagcaaagtggtgccattggcgaaagta
gctgaagaatcggcggcttaccaagtgttgactcctcagcagcttgaaaaagagatcagt
aaattagaagccgcaatgtatcagcatgcgcagaacttagagtttgagttagcggcgcaa
aaacgtgatgaaattcatcagttgcgtcagcagtttatcgccaatagttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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