KEGG   Vibrio cholerae O1 O395: VC395_A1042
Entry
VC395_A1042       CDS       T02099                                 
Symbol
ada
Name
(GenBank) ada regulatory protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vcr  Vibrio cholerae O1 O395
Pathway
vcr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VC395_A1042 (ada)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcr03000]
    VC395_A1042 (ada)
   03400 DNA repair and recombination proteins [BR:vcr03400]
    VC395_A1042 (ada)
Enzymes [BR:vcr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     VC395_A1042 (ada)
Transcription factors [BR:vcr03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    VC395_A1042 (ada)
DNA repair and recombination proteins [BR:vcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VC395_A1042 (ada)
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD
Other DBs
NCBI-ProteinID: ACP11872
Position
II:complement(1004981..1006339)
AA seq 452 aa
MTLLNELSAEVCQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFSSQAL
AVSAGYRPCLRCRPESAPHSWAWKGAETSFLRALTLIEQGELDGSLETLASRLGISDRYL
RQLFQRHLGMPPKQYAQIQQLMFAKQLLHTSQISITEVAYASGFQSTRRFNDAFQKLFRL
TPTQVRRERAALPSRNHLSLAFRGPFDWAHMLDFYRLRAIEGMELIDEQSYQRHFVLGEG
TGWFKASMAQSHLDIEFEMERLSDLRHLVARLRRMFDLDADLISIEAHLEQLAPGLVRRT
GIRIPGVWNAWEAGVRAVLGQQVSVKAAIGQLNLLVSTLAASEGSTRYFPTPEQVQMSDL
SFLRMPERRKETLKRLADYVRLHPMDSPMAWLSLSGIGPWTVDYAQLRGESRSHCFLTGD
LIVKKALAKFPQLTAESVAPWGSYATFHCWSH
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgacattgcttaatgaattatccgcagaggtgtgccaacgcgctcggatgagccgagat
ccacggtttgatgggcgtttttttgttgcggttaaaaccacagggattttttgccgcccg
atttgcccagccaacctaccgaaagaagagaatgttgagtatttttcctcgcaagcgtta
gcggtatcggcgggctaccgaccttgtttgcgctgccggcctgaaagcgctccccattca
tgggcgtggaaaggagccgaaacctcatttctacgtgccttgactctgattgagcaggga
gagctggacggcagtttagagactttagcctcacgcttaggtatcagtgaccgttatctg
cgccagctttttcagcgtcatttaggaatgccgcctaaacaatatgcgcagatccagcag
ctcatgtttgccaaacaattactgcatacgagccaaatttcgattaccgaagtggcttac
gccagtggatttcagagcacccgccgttttaatgatgcgttccaaaaattatttcggttg
acgccgacccaagttcggcgagaacgagccgctcttccttctcgaaatcatctgagctta
gcttttcgcggcccttttgactgggcgcatatgttggatttttatcgtctgcgagcgatt
gaaggcatggagctgatcgatgaacagagctatcaacgtcattttgtccttggtgaaggt
acaggatggtttaaggcgagcatggcacagtcgcacttagacattgagtttgagatggag
cgtttgagtgatcttcgccacttagtcgctcggctgcgacgaatgtttgatctcgatgca
gacctgatcagtattgaggctcatttagagcagttagctccgggattggtacggcgcacc
gggatccgtatccccggggtatggaatgcatgggaagcgggagtgcgcgcagtgctcggt
caacaagtttcagtcaaagccgcaattggacaattgaacttgttagtctccacgctggcg
gctagcgaagggtcaacacgttatttcccaaccccagaacaagtgcaaatgagcgactta
agctttttacgtatgccggaaaggcgtaaggaaaccttaaaacgtttggcggactacgtc
cggttgcatcctatggattcgccaatggcatggttatcgctaagcgggattggtccttgg
actgtcgattacgcgcaattgcgcggtgaatcacgtagccactgttttttaaccggagat
ttgatcgtgaaaaaagcactggcgaaatttcctcagttaactgccgaatcggtcgcccct
tggggcagttatgccacttttcattgctggagccactaa

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