KEGG   Vibrio coralliilyticus OCN014: JV59_01560
Entry
JV59_01560        CDS       T03497                                 
Name
(GenBank) peptidase
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
vct  Vibrio coralliilyticus OCN014
Pathway
vct00550  Peptidoglycan biosynthesis
vct01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vct00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    JV59_01560
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vct01003]
    JV59_01560
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vct01011]
    JV59_01560
Enzymes [BR:vct01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     JV59_01560
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     JV59_01560
Glycosyltransferases [BR:vct01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   JV59_01560
Peptidoglycan biosynthesis and degradation proteins [BR:vct01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   JV59_01560
SSDB
Motif
Pfam: Transgly UB2H Transpeptidase
Other DBs
NCBI-ProteinID: AIS53870
Position
1:302677..305037
AA seq 786 aa
MTKKKTPASSKTKTTKKPARKRATARRKPTKKGQRSWLKMLWGVTWKLGLAGFALLLFVG
IYLDSVVKQRFEGQLFDLPTVVYARILNLSPGDSISIQEVRNELDVLNYRKVRQPRYPGE
YSSSSTKIELIRRPFEFTDGPEPDRHVMLHFDRSGLLRIQSLESSGDLGYLRIEPKMLGM
LEKNHDEQRLFLRRDQFPEVMVDALLATEDRDFYQHDGVSPFAIARALVANLKAGRTVQG
GSTLTQQLAKNIFLSSDRTLWRKIREAYIALIIDYRYSKDRILEGYLNEVYLGQSRGEAI
HGFGLASRLYFGQPIQELRIDQLALLVGMVKGPSYYNPVRFPERAKERRDLVLRLMMQQG
ILSANQYDMAASRPLDIQDNPRIASRQPAYFQQLKIELKEKVGDAFQSDIGLRVFTSLDP
VSQQELEQAIAKKIPQLSKVAGKSLEGAAIAVDRHTGEIRAMVGGKRTGYDGFNRALNAS
RQIGSLAKPAVYLTALEHPDKYNLATTLHDKPISLKGSKGSVWSPRNYDRKFRGDVPLYI
ALAKSLNVPTVQLGMQLGIPNVVNTLEKLGVDRNEIRPVPSMFLGSFTLTPFQVAQMYQT
LTNSGKRAPLSALRSVVDLEGNALYQSLPRMSQTIDQQAAWLTTYAMKRGVLEGTGRYLN
SQFGWATLAGKTGTSNDTRDSWFVGVDGREVTTIWLGRDDNKPTKLTGSSGALRVYAEYL
NHRIPEKLTLPWPKGISTLGFSHTEQGSLQLDCDNQFKLPVWDANNVLKQQCDSQPTQWI
KKIFSW
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgaccaagaaaaaaacacctgcgagcagcaaaaccaaaacaaccaagaagcctgctcgc
aaacgggcgacagcgagacgcaagccaaccaaaaaaggccaacgtagctggttaaaaatg
ttatggggagtgacctggaagctcggtttagctgggtttgccttgctgctgtttgtcggt
atttacctagacagtgtggttaaacagcgtttcgaaggtcagctgtttgatctgccgacc
gtggtttacgctcgcattcttaacctttctccgggtgattcgatttcgattcaggaagtt
cgcaacgaactcgatgtgctcaactaccgtaaagtacgccagccccgttatcctggtgag
tattcgtcgtcgtcaaccaaaattgaactgattcgccgtccgtttgagtttaccgatggg
ccggagccggatcgtcatgtgatgctgcattttgaccgttctggcttacttcgtattcag
tcgctcgaatcctcgggtgatcttggctatttgcggatcgagccgaagatgttgggcatg
ctggagaaaaatcatgatgagcagcgcctattcttgaggcgagatcagtttcctgaagtc
atggttgatgcattactggctaccgaagaccgagatttttatcagcatgacggagtctca
ccgtttgcgattgcccgagcattggtcgccaatctcaaagcaggtcgtacggtgcaaggc
gggagtaccctgactcagcagctcgcgaagaacatctttctctccagtgatcgaacgctt
tggcgtaagatccgtgaagcctacatcgcattgatcattgattatcgctacagcaaagat
cgtattctggaaggttacctgaatgaagtgtatttaggacaaagtcgcggagaagccatt
cacggctttggattagcttcccgcttatactttgggcagccgattcaagaactgcgcatt
gaccagctcgcattactggtgggtatggtaaaggggccatcctactacaacccggtacgc
tttcctgagcgagccaaagagcgtcgagatttagtgcttcgtctgatgatgcagcagggg
atcttgagtgctaaccagtacgacatggcagctagtcgcccgctagacattcaggataac
cctcgtattgctagccgtcagccggcttactttcagcagttgaagattgagctgaaagag
aaagttggtgatgcgtttcagtcggacattggtctcagggtgtttacatctctcgatccg
gtttctcaacaagagctggaacaggccattgccaagaaaatacctcagcttagcaaagtc
gcaggcaagtcacttgaaggagctgcaatcgccgttgaccgccataccggagaaattcgc
gctatggtcggaggtaaacggacaggctatgatggattcaatcgtgcgctgaatgccagt
cgtcaaattggctcgctagccaaaccggcggtctatctcaccgctctggaacatcctgac
aaatacaatctggctacgacgctgcacgataaaccgatcagccttaagggttcaaaaggc
agtgtttggtcgccgcgcaactatgaccgtaagtttcgaggggatgtgcctttgtacatt
gcattggcaaaatctctcaacgtaccgactgtgcagctaggtatgcagctcggcattcca
aatgttgtcaatactttggagaagttgggtgttgacagaaatgaaattcgtcctgtgccg
tcaatgttccttggttccttcacattaacgccattccaggtcgctcaaatgtatcagacg
ttgaccaattcaggtaagcgcgctccgttgtctgcgctgcgttcggtggtcgatttagaa
ggtaatgcgctgtatcagtcgttgccgcgaatgtctcaaactatcgaccagcaagcagct
tggctgacgacctatgctatgaaacgcggcgtcttagaaggcactggccgttatctcaac
agccagtttggctgggcgacgttagctggaaaaacgggaaccagtaacgatacgcgtgac
agctggtttgttggtgtcgatggacgcgaagtaacaactatctggcttgggcgagatgat
aataagccaacaaaactaacgggctccagtggtgcgttacgagtttatgcagaatatctc
aatcaccgtataccggaaaagctgacgttaccttggccaaaagggatcagtactcttggt
ttttctcatactgagcaaggcagtctgcaactggactgtgataatcagtttaaactgcca
gtttgggatgccaacaatgtacttaagcagcagtgtgacagccaacccacacaatggata
aagaaaatatttagttggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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