KEGG T03497: JV59

Vibrio coralliilyticus OCN014: JV59_01800

Entry

JV59_01800        CDS       T03497

Name

(GenBank) c-di-GMP phosphodiesterase

K20965

c-di-GMP phosphodiesterase [EC:3.1.4.52]

Organism

vct Vibrio coralliilyticus OCN014

Pathway

vct05111

Biofilm formation - Vibrio cholerae

Brite

KEGG Orthology (KO) [BR:vct00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    JV59_01800
Enzymes [BR:vct01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     JV59_01800

SSDB

Motif

Pfam:

EAL GGDEF PAS_4 PAS_8 PAS PAS_9

Other DBs

NCBI-ProteinID:

AIS53913

Position

1:complement(370416..372455)

AA seq 679 aa
MLSQQLQHWFTKITANSPFFFAILDSQHNYAMVNGRYCDIAGLSNQELVGMSDTQTLGKH
FYNQLKPYYERAFNGESLEAEITLNEIDLETSLHFSLAPIEIDNKIEYVAFHAVDTSEKH
ILVRSLEESESKFSTLTTLLPDGLLLVEEDCIISANPAAVRLLGFEDNSDLLGEELSRLF
VDEKTKTVFSKSLISSLAKAPLTCLTGPRCGFERRVQLHADDAMVLGSNTQLVLIQDADE
TPKHLNNKPLEDAHIDSLTGLYNRFGFTKRLEQFIHNETPLLLLYLDIDNFKNINDSLGH
HIGDKVIKEVSSRLKRLLPQHAVVGHLGGDEFGLILPEPENNRMAEILAERIISLINQPF
DLHHFSKRLACSIGSVTYPGDGNDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALIRWKHPVEGYISPGAFIPVAER
AGLIEHLGRVVMREVFSTVKRWKLQGILPGRVAINLSPEQFGNPKLIDYMEKLLRTTELD
PNCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFINDIDTLPKQVTVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCNSIQGFHFYR
PQPKQEVEELFAQHRRHKN

NT seq 2040 nt +upstreamnt +downstreamnt
atgctttcgcaacaactacagcattggttcacgaagataacggcaaacagcccgtttttt
ttcgccattttggatagccagcataactatgccatggttaatggtcgctattgcgatatc
gccggcctatccaatcaagaactggtcggtatgagcgatacgcaaaccttaggtaagcat
ttctataaccaactcaaaccctactatgagcgtgccttcaacggtgaatctctcgaagca
gaaatcacactgaacgaaattgacctcgaaaccagtctgcatttcagcttagctcccatc
gaaatcgacaataaaattgaatacgttgcctttcatgcggtcgacacatcagaaaaacat
attctggttcgttctctagaagagtcagaaagtaaattctcaacgctcaccactttgttg
cctgatggcctactactggtcgaagaggattgcatcatttcagccaaccctgcggcagta
cgtttactcggttttgaagataacagtgatttgttaggtgaagaactttctcgactattt
gtcgatgagaaaaccaaaacggttttcagtaaatccctcatcagttcactggcgaaagcg
cccctgacctgtctaacagggccaaggtgtggtttcgaacgccgtgttcagctccacgct
gatgacgcgatggtactaggcagcaatactcaattggtgctgattcaagatgccgacgag
acaccaaaacacctaaataacaagccgttagaggatgcacacattgattctttaactggc
ctctacaatcgttttggttttaccaaacgtcttgagcagttcattcataatgaaacacca
ctattactgctctacctcgatatcgataatttcaagaacatcaacgactctttaggtcac
catattggtgataaagtgattaaagaagtgtcatctcgtcttaagcgtcttttaccgcaa
catgcggtagtagggcatttaggaggcgatgaatttggcctgatattaccggagccagaa
aacaatcgaatggcggagattcttgctgagcgcatcatctcactcattaaccagccattt
gatctgcaccatttcagcaaacgcttagcgtgctctatcggcagtgtgacgtatccagga
gatggcaacgacgcacgtattctgctgcaaaacgccgacaccgcgatgtacgaagccaaa
gaccgaggccgtaatcgtctgattaagttcaatgatcagatgaacaaagaagcgcgtatg
cgtttatggctggaaattgagctgcaaaaagctttacaacagaatggcttggaagtctgg
taccagcctaaggtcaacgctcgtgatttcagcatcaatggcgccgaagcccttatccgc
tggaagcaccctgtggaaggttacattagcccgggcgcttttatccctgtcgccgaacga
gcaggcttaattgaacacctcggtcgagtcgttatgcgagaagtattcagcacggttaaa
cgctggaaacttcaaggtattctgccgggtcgtgtcgcaatcaacctttcgccagaacaa
tttggcaatccaaaactgatcgattatatggagaagctactgcgtaccacagagcttgat
cctaactgcattacatttgaactgaccgaaagtgccgtaatgagcgacagtgaacacacg
ctgcaaatgctcaacgccattaaaaaacttggctttgctttatcgattgacgactttggt
accggttattcatcactttcttacctcgcccgcttcccgattgatgagcttaagattgac
cgcgcgttcatcaatgacatcgatacgctaccgaagcaggtgacagtaatcgaaaacatc
attaatctgggtaaatcgcttaacctgacggtggtcgcagaaggagtcgaaacccaacaa
caagcgactctgctctctaacctcaattgtaattcgattcagggcttccatttctatcgc
ccgcaaccaaagcaagaagtcgaagagctatttgctcagcatcgtcgccacaaaaactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system