KEGG   Vibrio cholerae O49 1154-74: VAA049_2519
Entry
VAA049_2519       CDS       T03828                                 
Symbol
ihfA
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
vcx  Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcx03032]
    VAA049_2519 (ihfA)
   03036 Chromosome and associated proteins [BR:vcx03036]
    VAA049_2519 (ihfA)
   03400 DNA repair and recombination proteins [BR:vcx03400]
    VAA049_2519 (ihfA)
DNA replication proteins [BR:vcx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VAA049_2519 (ihfA)
Chromosome and associated proteins [BR:vcx03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    VAA049_2519 (ihfA)
DNA repair and recombination proteins [BR:vcx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      VAA049_2519 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: AKB02932
UniProt: A0A085R1G8
Position
complement(2790371..2790667)
AA seq 98 aa
MALTKAELAEALFEQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNER
PGRNPKTGEDIPITARRVVTFRPGQKLKARVENIKVEK
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgctcacaaaggccgaattggctgaagccctgttcgaacagctcggcatgagcaag
cgggatgccaaggatacggttgaggtgttttttgaagaaattcgtaaagcactcgaaagt
ggcgaacaggtaaaactctccggttttggtaattttgacctacgagataaaaatgaacgt
ccgggtcgaaaccctaaaaccggtgaagatattcctattaccgctcgacgtgtcgtaacg
ttccgcccagggcaaaaattgaaagcccgtgtcgagaacatcaaagtcgaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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