KEGG   Vibrio cholerae O49 1154-74: VAA049_2794
Entry
VAA049_2794       CDS       T03828                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx00550  Peptidoglycan biosynthesis
vcx01100  Metabolic pathways
vcx01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VAA049_2794 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    VAA049_2794 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcx01011]
    VAA049_2794 (mrdA)
Enzymes [BR:vcx01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     VAA049_2794 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:vcx01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   VAA049_2794 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer SURF1
Other DBs
NCBI-ProteinID: AKB02874
UniProt: A0A085QD95
Position
3092716..3094632
AA seq 638 aa
MLRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRI
KVVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAF
EKERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYV
SRINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTL
KYVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVH
GISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWR
IPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTG
IDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKV
IAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAF
QNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENG
GGGSSNGAPVVRQIFDHVILGKKEEEPKAESKEEVIQP
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgttacgccagcatacccctatccgcgaccatcaagccgaaacgcatctgtttcgtaat
cgtgccatcgtctcttttgtcgggatcttgatctgtatgggtctgctggtgaccaacttg
tacaatattcagatcaaccaatatcaagactacaaaacgcgatccaacgataaccgcatc
aaagtcgttccgattgcgcctaaccgcgggctgatttttgaccgcaacggtgtgcttctg
gcggaaaaccgtccggtattcaacttagaagtgatcccagaaaaagtgccaaatatggaa
gagaccattgcgcgcttacaacaactcattgagatcagcccagaaaagcttgccgccttt
gaaaaggaacgtaaacagactcgccgctttaattctgtaccgctactgactcagcttacc
gacgatgaagtggcgaagttttccgttaatcaacataaattccccggcgtttcggtcacc
gctaacctcaaacgctattacccctatggcgaagtgctgacccacgtgattgggtatgta
tcgcggattaacgataaagatctcgaacgcttggacaaagaaggtaaaaaagccaactac
caagccacccgagacatcggcaaactggggattgaacgctactatgaagacttactgcac
ggtaccgctggttatcaggaagtcgaagtcaacagccgtggccgtgtcattcgcaccctt
aaatacgtcccacccattccgggaaaagatatcgtgctcaatctcgatatcgaacttcag
ctctatgcctacaagctgctcgaaggtcgccgcggctcgattgtcgctctcgatcctaaa
gataatggcgtgctcgccatggcatcgagcccaagttacgaccccaatgcattcgtgcat
ggtatttcaggtaaagcctacagcgatttactcaatgacaaacgtcgtccattagtaaac
cgcaccacgcttggcatttatccgccggggtcaaccgtcaaaccgtttattgcggtgtcc
gcactgcaagatgggatcattacacccaataccacccgtaatgatccgggttactggcgc
attcccaataccgatactcggcctttccgcgactggctacgttggggccacggccgggta
gacatcattaaatctctcgaagaatcggtagataccttcttctatcaaatcgcctatgac
atgggcatagataaactctccagttggatgatgcgctttggctttggggatctgacgggg
attgatatttacgaagagagtaaagccaatatgccaacacgcgagtggaaaatggcacgt
cacaaagtgccttggtatcaaggtgacaccattccggttgggattggacaaggctattgg
actgccacaccgatgcaaattgccaaagcgacatcggttttagttaaccacggtaaagtg
attgccccgcatctgctgcgtgccaccatagataatggtgaacagttctcaacccaaaaa
gagaccgagtacaccacttacccgccgattgatggcgtgccgaaaaagtattgggacatg
gctatccatggcatgtatctggttaaccatggtgctaaaggaaccgcacgtcgcgccttc
cagaatatgccttacgaaagtgcgggtaaatcagggacagcgcaagtatttggtctggcg
gaaggccaaaagtataacgcaagtgagttagcagagcacttacatgaccatgctctgttt
acaggttttgcccctgtcaaagatcccaaagttatcgtcacctttgtattggaaaatggc
ggcggcggctccagtaatggtgcgccagtcgtgcgacaaattttcgatcacgtgattttg
ggcaaaaaagaagaagagccaaaagcagaatcaaaagaagaggtaatacagccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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