KEGG   Vibrio cholerae O27 10432-62: VAB027_347
Entry
VAB027_347        CDS       T03829                                 
Name
(GenBank) cytidine and deoxycytidylate deaminase zinc-binding region family protein
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz00240  Pyrimidine metabolism
vcz01100  Metabolic pathways
vcz01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    VAB027_347
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcz02044]
    VAB027_347
Enzymes [BR:vcz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     VAB027_347
Secretion system [BR:vcz02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   VAB027_347
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam APOBEC3 APOBEC_N HVO_2753_ZBP CxC5 zf-ribbon_3 APOBEC2
Other DBs
NCBI-ProteinID: AKB07908
UniProt: A0A086SKU0
Position
complement(395482..395967)
AA seq 161 aa
MISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQNRIVSVGFNGYPHGISDSASTDDRDM
KYLKTLHAEENAILFAKRDLDGCEIYVTHFPCPNCAAKIIQTGISAVHCPEQSEDFLSRW
GDKIKVSQDMFLQAGVKVHWLPLVELKHINTIELPSESSNP
NT seq 486 nt   +upstreamnt  +downstreamnt
atgatttcaaaatgggcgcaacgttttttccaaatggctgaattagttggctcgtggagt
aaagatccttccacgcaggtaggcgctgtgatcaccaaacaaaaccggattgtctccgtt
ggcttcaatggctacccacacggtatctctgacagtgccagcaccgatgaccgtgatatg
aagtatttgaaaacgctgcacgcggaagagaatgcgattttgtttgccaagcgtgatttg
gatggctgtgagatttacgtcacccacttcccttgccctaattgcgcggccaagattatc
caaactgggatctctgccgtacattgccctgagcaatccgaagattttctgtcacgctgg
ggcgataagatcaaagtcagccaagacatgttcttacaagctggggttaaagtgcattgg
ctacctttggttgaactgaagcacatcaatactattgagctgccttcagaatcgagcaat
ccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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