KEGG   Vibrio diabolicus: AL552_19920
Entry
AL552_19920       CDS       T05332                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00300  Lysine biosynthesis
vdb01100  Metabolic pathways
vdb01120  Microbial metabolism in diverse environments
vdb01230  Biosynthesis of amino acids
Module
vdb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AL552_19920 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vdb01002]
    AL552_19920 (dapE)
Enzymes [BR:vdb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     AL552_19920 (dapE)
Peptidases and inhibitors [BR:vdb01002]
 Metallo peptidases
  Family M20
   AL552_19920 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: AVF95829
Position
1:2182595..2183731
AA seq 378 aa
MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGSEA
PLFAFAGHTDVVPAGKLEHWDTHPFEPTIIDGYLHGRGAADMKGSLAAMVVAVERFIAEN
PDHKGSIGFLITSDEEGPFINGTVRVVETLMARGENIDMCIVGEPSSTEVVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHESLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFHVQFNLRFSTELNNDAIVQRVTETLDKHELDYDLKWTFNGDPFLTDTG
ALLDAVVAAVADVNDTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYENTLKHLLAK
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgacagacagtccagtattggcacttgctaaagatctgatcagtagacagtccgtaacg
ccggaagacgcaggttgtcaggatttgatgatcgagcgcttaaaagcactcgggtttgaa
attgaagtgatggtatttgaagacaccacaaacttctgggctcgacgtggttcagaagcg
ccgctatttgcgtttgctggccacaccgatgtggtacctgctggcaaactggagcactgg
gatacacatccgtttgaaccaactattattgatggttacctacacggtcgcggtgcagcg
gacatgaaagggtcgctagctgctatggtcgttgctgtcgaacgcttcattgcagaaaac
ccagaccacaaaggctcaatcggctttctaattacgtcggatgaagaaggaccatttatc
aatggtaccgttcgtgttgtagaaacgttgatggcacgtggcgaaaatatcgacatgtgt
atcgtcggtgaaccatccagcaccgaagtggttggcgatgtggtgaaaaatggacgtcgc
ggttctatcacgggcgatttaacggtaaaaggaacacaaggccacgtggcctatcctcac
ctagccaataaccctgtgcacgagtctctactcgcgattcatgaactcgcaacaacagag
tgggacaaaggaaatgattatttcccaccaaccagcttccagatcccgaacgtatcggct
ggcactggtgcgtctaacgtcattcctggcgagttccatgttcagttcaacctacgtttt
agtactgagcttaacaatgacgcaattgttcagcgtgttaccgaaacactagacaagcat
gagctggactacgacctaaaatggacattcaacggcgacccattcctgaccgatacaggc
gcgctgctagatgcggttgttgctgctgttgccgacgtgaatgatacgaagccagcacta
cttacaactggcggtacatctgatggtcgctttattgctcgaatgggtggtcaagtcgta
gagttaggccctgtgaatgctacgattcataaagtgaacgaatgcgtgaaagtggacgat
ctagaaaagttgactgacatgtacgagaacacgttgaaacacctgttagcgaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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