KEGG   Vulcanisaeta distributa: Vdis_0846
Entry
Vdis_0846         CDS       T01313                                 
Name
(GenBank) K-like, type 1, subgroup
  KO
K03679  exosome complex component RRP4
Organism
vdi  Vulcanisaeta distributa
Pathway
vdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Vdis_0846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vdi03019]
    Vdis_0846
Messenger RNA biogenesis [BR:vdi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Vdis_0846
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Vdis_0846
SSDB
Motif
Pfam: KH_6 RRP4_S1 KH_1 KH_2 RRP40_S1 ECR1_N
Other DBs
NCBI-ProteinID: ADN50238
UniProt: E1QP67
Position
complement(812642..813379)
AA seq 245 aa
MPLYVNDKQIVLPGDAIATKDYNVSGSIYWDGDVAYSAVVGLINIRGERDVEVIPLSGIY
KPRVGDIVIGYVIDIGLTGWVIDIKSPYSAYLPIQEATLKPVDLMTVDLKSLLGIGDIVL
ARIIDFNLTKDYPVTLTLKEARLGRIEGGTLVEIDASKVARVIGRRGSMVSIFSEELGCD
VTVGQNGRVWIRCRDPGDESFVARVIKLIESESHTSGLTDRVRSIVTQYKARKVSIKSQS
LTTAS
NT seq 738 nt   +upstreamnt  +downstreamnt
atgccgctgtacgtaaacgacaaacagatagtgctgcccggggatgcgatagccacgaag
gactataacgtcagtggtagtatttactgggatggtgatgtggcttactcggcagttgtt
gggctcataaacataaggggcgagagggatgtggaggtcataccgctcagcggcatttac
aagcctagggttggggacatagtcattggttatgtaattgacatcggactaactgggtgg
gttatcgacattaaatccccatactcggcatacctccccattcaggaggccacgcttaag
cctgttgatttaatgaccgttgacctaaagagcctgttgggtattggcgatatagtgctt
gccaggataatagattttaacctgacaaaggattacccagtaacgttaactcttaaggag
gctaggcttggtaggattgagggtgggacgctcgttgagattgatgcgagtaaggttgcc
agggtgattggtaggaggggctctatggttagcatattcagtgaggagcttggttgtgac
gtaactgttggtcagaatggtagggtttggattaggtgtagggatcctggggatgaatca
tttgttgccagggtaataaagttgatagagagtgaaagccacacaagcggattaactgat
agggtcaggtcaatagtgactcagtacaaggccaggaaggtgagcattaagtcccagagc
ttaaccacagcttcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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