KEGG   Vibrio antiquarius: VEA_002110
Entry
VEA_002110        CDS       T01107                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vex  Vibrio antiquarius
Pathway
vex00300  Lysine biosynthesis
vex00470  D-Amino acid metabolism
vex01100  Metabolic pathways
vex01110  Biosynthesis of secondary metabolites
vex01120  Microbial metabolism in diverse environments
vex01230  Biosynthesis of amino acids
Module
vex_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vex00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VEA_002110
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VEA_002110
Enzymes [BR:vex01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     VEA_002110
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ACY50273
Position
1:532231..533484
AA seq 417 aa
MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRTGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtcccacttcaa
gctcttgcagagcaatatggcactcctctttacgtatattctcgagccacgctagagcgc
cactggaaggcgtttgatagtgctgtgggtcaacatcctcatctagtttgctacgcggtg
aaagcgaactcaaacctaggcgtattgaacgcactggcgcgtttgggttcgggctttgat
atcgtatcaggtggtgaacttgagcgtgtgattgccgcaggcggtgatccgaagaaagtc
gtcttctctggtgttgggaaaacacctgcagaaatgaagcgcgctcttgagctaggtatc
aaatgtttcaacgttgaatctgagccagagctagaacgtttgaacaaggttgcgggtgag
cttggtgtgattgcgccaatttctctgcgtatcaatccagatgtcgacgcgaaaacacac
ccttacatttcgactggtcttcgcgacaataaattcggcattgcatttgatcgtgcgcca
gatgtttataaattcgcgcaaagcctgccgaacttgaatgtgcaaggcatcgactgccac
attggttctcagctgaccaatatcgacccatttatcgacgcgacagaccgtttattagct
ctgattgatgatttaaaagcgcaaggcattaacattcgtcaccttgatgtcggcggtggt
ttgggtgtggtctatcgtgatgagttaccaccacagccttcagattacgccaaagcgtta
ctaggtcgtcttgaaaatcaccaagacttggagctgatttttgagccgggccgagcaatt
gctgcgaatgcaggtatcttgctaacgcgtgttgagtttttaaaacatactgagcacaag
aactttgccatcatcgatgcggcaatgaacgacttgatgcgtcctgcactataccaagca
tggcaagatatcgtgccagtttcgccgcgcacgggtgaagctcagacttacgatttggtt
ggccctatttgtgaaaccggcgacttcttgggtaaagatcgcgcactcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgttatgtcttcgaactac
aatactcgtacccgagcggcagaagtaatggtggatggtaaacaaagccacttagttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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