KEGG   Vitreoscilla filiformis: VITFI_CDS0481
Entry
VITFI_CDS0481     CDS       T04960                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vff  Vitreoscilla filiformis
Pathway
vff03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vff00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VITFI_CDS0481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vff03019]
    VITFI_CDS0481
   03110 Chaperones and folding catalysts [BR:vff03110]
    VITFI_CDS0481
   03029 Mitochondrial biogenesis [BR:vff03029]
    VITFI_CDS0481
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vff04147]
    VITFI_CDS0481
Enzymes [BR:vff01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VITFI_CDS0481
Messenger RNA biogenesis [BR:vff03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VITFI_CDS0481
Chaperones and folding catalysts [BR:vff03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VITFI_CDS0481
Mitochondrial biogenesis [BR:vff03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VITFI_CDS0481
Exosome [BR:vff04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VITFI_CDS0481
  Exosomal proteins of other body fluids (saliva and urine)
   VITFI_CDS0481
  Exosomal proteins of breast cancer cells
   VITFI_CDS0481
  Exosomal proteins of colorectal cancer cells
   VITFI_CDS0481
  Exosomal proteins of bladder cancer cells
   VITFI_CDS0481
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ASM76260
UniProt: A0A221KBP2
Position
complement(517599..519242)
AA seq 547 aa
MAAKDVIFGADARHRMVEGVNILANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DKAVAALVIQLRAASKATTTSKEIAQVGTISANSDADVGQIIANAMDKVGKEGVITVEDG
KSLNNELDVVEGMQFDRGYLSPYFINNQEKQAAILDNPFVLLYDKKISNIRDLLPTLEQV
AKAGRPLLIIAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGMALDKVTLADLGQAKRVEVAKENTTIIDGAGSAADIEARVKQIRIQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARQTAGAIKGDNADQDAGIKLVLKAIEAPLREIVANAGGEPSVVVNAVLNGSGNYGFNA
ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVAEAPKDDAPAMPGGGMGGM
GGMGMDM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtcattttcggcgcagacgcccgtcaccgcatggttgaaggcgtg
aacatcctggccaacgccgtcaagaccaccctgggccccaagggtcgcaacgtggtgctg
gagcgctccttcggcgccccgaccgtgaccaaggacggtgtgtccgtggccaaggaaatc
gagctgaaagacaagcttcagaacatgggcgcccagatggtcaaggaagtcgcttccaag
acgtctgacaacgctggcgacggcaccaccaccgccaccgtgctggctcaagccatcgtg
cgcgaaggcatgaagtacgtggccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcggttgccgccctggtcatccaactgcgcgccgcttcgaaggccaccacgact
tcgaaggaaatcgcccaagtcggcaccatttccgctaactcggacgctgacgtcggtcaa
atcatcgccaacgcgatggacaaggtgggcaaggaaggcgtgatcaccgttgaagacggc
aagagcctgaacaacgagctggacgtcgtcgaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaaccaggaaaagcaagccgccatcctggacaacccgttcgtg
ctgctgtacgacaagaaaatcagcaacatccgcgatctgctgccgacgctggaacaagtc
gccaaggctggccgcccgctgctgatcatcgctgaagacgtggacggcgaagcgctggcc
actctggtggtgaacaccatccgtggcatcctgaaggttgtggccgtcaaggctccgggc
tttggcgatcgtcgcaaggccatgctggaagacatcgccatcctgaccggtggcaaggtc
atcgccgaagaagtgggcatggccctcgacaaggtgaccctggccgacctgggccaagcc
aagcgcgtcgaagtcgccaaggaaaacaccaccatcatcgatggcgctggttccgctgcc
gacatcgaagcccgcgtgaagcaaatccgcatccagatcgaggaagccacctccgactac
gaccgcgaaaagctgcaagagcgcgtggccaagctggctggcggcgtggccgtgatcaag
gtgggtgctgccaccgaagtcgaaatgaaggaaaagaaggcacgcgtggaagacgcgctg
cacgccacccgcgctgccgtggaagaaggcatcgtggctggcggcggtgtggctctgctg
cgtgctcgccaaaccgctggcgccatcaagggcgacaacgctgaccaagacgccggcatc
aagctggtgttgaaggccatcgaagccccgctgcgcgaaatcgtggccaacgccggtggc
gaaccgagcgtggtggtgaacgctgtgctgaacggttcgggcaactacggcttcaacgct
gccaacgacacctacggcgacatgatcgaaatgggcatcctggatccgaccaaggtgacc
cgcaccgcgctgcaaaacgccgcttccgtggcttcgctgatgctgaccaccgaatgcatg
gtcgctgaagccccgaaggatgacgctccggccatgccgggtggcggcatgggtggcatg
ggcggcatgggcatggacatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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