KEGG   Vitreoscilla filiformis: VITFI_CDS2635
Entry
VITFI_CDS2635     CDS       T04960                                 
Name
(GenBank) recombinase RecR
  KO
K06187  recombination protein RecR
Organism
vff  Vitreoscilla filiformis
Pathway
vff03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VITFI_CDS2635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vff03400]
    VITFI_CDS2635
DNA repair and recombination proteins [BR:vff03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     VITFI_CDS2635
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      VITFI_CDS2635
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_C RecR_ZnF Toprim
Other DBs
NCBI-ProteinID: ASM78412
UniProt: A0A221KH85
Position
complement(2787349..2787915)
AA seq 188 aa
MLIDALHGLPGVGVKSAQRMAYHLLQHDRHGAMRLSQALAGAVQTVHHCTRCHTFTEDEV
CPICLDPGRDARQLCVVETPADQAAMERTGSYHGLYYVLMGRMSPLEGIGASELGMELLT
RRAVDGVVEEVILATSFTAEGEATAHILGEGLRQHGLVVTRLARGVPAGSELEYVDLSTI
AHALADRR
NT seq 567 nt   +upstreamnt  +downstreamnt
ttgttgatcgatgcgctgcatggactgcccggtgtgggcgtcaagtccgcgcagcgcatg
gcctatcacctgttgcaacacgatcggcatggtgccatgcggttgtcgcaagcgttggcc
ggtgcggtgcaaacggtacatcactgcacccgctgccacacgttcaccgaagacgaggtg
tgtcccatctgcctcgatccggggcgcgatgcacgccagctctgcgtggtggaaaccccc
gccgaccaagccgccatggagcgcaccggcagctatcacgggctgtattacgtgctcatg
gggcgcatgagcccgttggagggcatcggtgccagcgaactcggcatggaattgctgacg
cgccgggccgtggatggtgtggtggaggaggtgatcctcgccaccagtttcaccgctgag
ggcgaagccaccgcccacattctgggagaaggcttgcgccagcacggtttggtggtcacg
cggctggcgcgtggggtgccagcgggcagtgagctggaatacgtggatctctccaccatc
gctcacgccctggccgatcgacgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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