KEGG   Vibrio fluvialis: AL536_18000
Entry
AL536_18000       CDS       T04379                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vfl  Vibrio fluvialis
Pathway
vfl02024  Quorum sensing
vfl03060  Protein export
vfl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AL536_18000
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL536_18000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AL536_18000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vfl02044]
    AL536_18000
Enzymes [BR:vfl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AL536_18000
Secretion system [BR:vfl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AL536_18000
  Eukaryotic Sec-SRP protein
   AL536_18000
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW KTI12 AAA_30 AAA_33 AAA_19 AAA_31 Mg_chelatase APS_kinase AAA_24 T2SSE AAA_14 AAA_16 DO-GTPase1 YqeC ATP_bind_1 Helicase_RecD KAP_NTPase Rad17 DUF3867 Thymidylate_kin AAA_18
Other DBs
NCBI-ProteinID: AMF95316
UniProt: A0A0X8LNN8
Position
2:complement(2253428..2254810)
AA seq 460 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVREFVSRVKEKAV
GVEVSKSLTPGQEFIKIVRGELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLEVDFFPSSPDQKPIDIANAAIDHAK
KKFFDVLIVDTAGRLAIDEQMMGEIQDLHKAIKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMLDKLPGMSQL
PSDIKDKVDDRMFKQMEAIISSMTMKERQNPELIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGLMGGGGGGFGGGFFGR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaacggatcgattgtccaaaacgctgaaaaatatcagcggtaaaggt
cgtcttactgaagacaacattaaagagacgttacgcgaagtacgtatggctctgctggaa
gcagacgttgcgttgccggtcgtacgtgaatttgtcagccgcgtaaaagagaaagcggtt
ggcgttgaagtttcaaaatccctgacgccaggccaggaattcatcaaaatcgttcgcggt
gaactcgaagcggtgatgggggagtccaatgaagctttgaatctggcggctcagccaccg
gcagtgattctgatggcgggtttgcagggggcgggtaaaaccacctcggtcggtaaactg
tcgaaactgctgaaagagcgcgataagaagaaagtgctggtggtttcagctgacgtatat
cgccctgcggcgatcaaacagttggaaacgctggccaatgatctcgaggtggatttcttc
ccatcgtctccggatcaaaagcctattgatattgctaatgcggcgattgaccatgcgaag
aagaaattctttgatgtgctgattgtcgataccgcgggccgtctggcgattgacgagcag
atgatgggcgaaatccaagatctgcataaagcgattaagccagttgaaacgctatttgtg
gtcgatgcaatgaccggccaggatgcagccaacacggcgaaggcgtttggtgatgcactg
ccgctaaccggtgtgattctgacgaaagtcgacggtgacgcccgtggcggtgctgcgctg
tccgtgcgtcatattaccgggaaaccgatcaagttccttggtgtgggtgagaaaaccgac
gcgctggaacctttccacccggatcgcgtggcctcacgtattctgggtatgggtgatgtc
ctgtcgctgatcgaagatctgcaacgcaatgtcgaccaggaaaaagccgagaaactggcg
aagaaattcaaagagaagaaaggcttcgatctggaagattttcgtgaacagctaggccag
atgcagaacatgggcggcatgatggggatgctggataagctgccaggtatgtctcagctg
ccttcggacatcaaagacaaagtcgatgaccgtatgttcaaacagatggaagcgatcatc
agttcgatgaccatgaaagagcgtcagaaccctgaactcatcaaaggctcacgtaagaaa
cgcatcgcggcaggttcagggacgcaagttcaggatgttaatcgcctgctgaagcagttc
acgcagatgcagaagatgatgaagaaaatgcaaaaaggcggcatgaaaggcatgatgcgt
aacatgcaaggcctgatgggtggtggtggcggaggcttcggtggcggatttttcggccgc
taa

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