KEGG   Aliivibrio fischeri MJ11: VFMJ11_0259
Entry
VFMJ11_0259       CDS       T00754                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase A
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vfm  Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:vfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vfm03009]
    VFMJ11_0259
   03016 Transfer RNA biogenesis [BR:vfm03016]
    VFMJ11_0259
Enzymes [BR:vfm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     VFMJ11_0259
    5.4.99.29  23S rRNA pseudouridine746 synthase
     VFMJ11_0259
Ribosome biogenesis [BR:vfm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VFMJ11_0259
Transfer RNA biogenesis [BR:vfm03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    VFMJ11_0259
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACH65161
UniProt: B5FGF0
Position
I:266493..267230
AA seq 245 aa
MAMLEYLPPQDPWIDIVYQDESILVVNKPSGLLSVPGRAPEHYDSMWSRLKVEFPDIQVV
HRLDMSTSGLMLFAMNKYSERHLKKQFQYRLTHKIYYARVWGNIEQDEGEIDLPLICDWE
NRPKQKVCFEHGKPSQTRYQVVRREEKTTIVRLLPITGRSHQLRVHMLSIGHPIVGDEFY
ANEEAKNFSSRLELHAAELSFYHPKSDWVRSIFVPCDFYPEAQEMMFSIYDPTRKLPDYK
TLKSS
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcaatgctagaatatttaccacctcaagatccgtggatagacattgtttatcaagac
gaatctattttagtggtaaacaagccatctggtttattatctgtacctggccgagctcct
gagcattacgatagtatgtggagccgtttaaaggttgaattccctgatattcaagttgta
catcgtttagatatgtctacgtcagggttaatgttgtttgcgatgaataaatacagcgaa
cgtcatttaaagaaacagtttcagtaccgtctaacgcataaaatttattatgcgcgagta
tggggaaacattgagcaagatgaaggtgaaattgatttacctttaatttgtgattgggag
aatagaccaaaacagaaagtctgttttgagcatggcaaaccttctcaaactcgctatcaa
gttgtaagacgtgaagagaaaacgacgattgttcggttgctaccgattactgggcgctct
catcaattacgtgtacatatgctatcgattgggcatccgattgttggggatgagttttat
gcgaatgaggaagcgaagaatttctcttctcgtttggagttgcatgcggctgaattgagc
ttttaccatccaaaatcggactgggttcgctctatttttgtcccttgtgatttttatcct
gaagcacaagagatgatgttttctatttatgatccaacaagaaagctaccagattataaa
acattgaaatcatcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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