KEGG T01680: vfu

Vibrio furnissii: vfu_A01001

Entry

vfu_A01001        CDS       T01680

Name

(GenBank) c-di-GMP phosphodiesterase A-related protein

K20966

c-di-GMP phosphodiesterase [EC:3.1.4.52]

Organism

vfu Vibrio furnissii

Pathway

vfu05111

Biofilm formation - Vibrio cholerae

Brite

KEGG Orthology (KO) [BR:vfu00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    vfu_A01001
Enzymes [BR:vfu01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     vfu_A01001

SSDB

Motif

Pfam:

EAL GGDEF HAMP Glyco_tranf_2_4

Other DBs

NCBI-ProteinID:

ADT86194

Position

1:complement(1042203..1044551)

AA seq 782 aa
MKLNHRILLLIAPVILLSAAASSYIIYTSQKDALLKRTDSYLQLSMEKLASHFRQTRALV
NSYSFTLAKSDIIRHYFYYEHNPYRELELVDNLHQTISILQPSDSQHVALSILDGDKNIL
YYAENSYDPFAQMDPLVKQFVDQRFNQTARTSDVSYTENSAGEGILVRYDVLDTKTLQTP
LSYNRDEVFFIVVYVVLDKFNALRQHIEFDNQSPIFFQDHPPQNTQRLTQSVELQPGMYA
ILDPAPLLFRDRLARIQKELMLAFGFSALVTVLLLLILLYKHVINPILRLDKQLQEVENK
QRKNIEILNSQDEIGRLSSRFYAMYTELDSTYQRTKTLAEYDHLTKLANRRQFQVQAEKT
LLETPRNSHIWVLYIDLDNFKYVNDKYGHQIGDSLLVSFAEHVRCLCEAFNQQHYTYSLA
ARLSGDEFAIVLCAPSRKADCATQFAQRLLDPMQKQDNSPLGHFPITASIGIATYPEDGQ
QIEKLLLNADTAMYQAKNAGKNQVAYYSQQLDEIVQRRNTIERALRLGHFDQEFSLVYQP
YFTCSGHQVAGFEVLLRWESEQLGDVSPDEFIPIAEQTGLFGQIDRWVIQSAFAELNTLR
EQFTQPIQISINLSSAELDSQHLAQFIHQHAQQHQVVPRWVDFEITETFAADSKSFPLLH
ELSRLGYGLTIDDFGSGYTSIAQLVQYPVQKIKFDRAFLDTLIATNKQKVIKPLIDLCHS
QHMKVTAEGIESETMHQWLANYRCDYMQGYFFGKPMSLSEVCAWQQPNEMTPSYEKSDHC
FS

NT seq 2349 nt +upstreamnt +downstreamnt
atgaagctcaaccatagaatccttctgctgattgcgccggtgattctgctcagtgctgca
gcctccagctatatcatttacaccagccagaaagatgcgttgctgaaacggaccgacagc
tatttgcaattgagcatggaaaagctggccagccatttcaggcaaacgcgcgccttggtc
aacagttactccttcacgctcgccaaaagcgacatcattcgccactacttctactacgaa
cacaatccctaccgcgaattagaactcgtggacaatttgcatcaaaccatcagtattctt
caacccagcgatagtcagcatgttgcgctgtcgatcctcgacggtgacaaaaacattctc
tactacgccgagaacagctacgacccgtttgctcaaatggatccgttggtcaaacagttc
gtcgatcagcggttcaatcaaaccgcgcgtacttccgatgtcagctacaccgaaaactca
gccggtgaaggcatattggtgcgctacgacgtgctggataccaaaacattgcaaacaccg
ctgagctacaaccgcgacgaagtcttttttatcgtggtgtatgtggtgctggataaattt
aacgcgctgcgccaacacattgaatttgataaccaaagccccattttctttcaagaccat
ccaccgcaaaacacgcagcgtctgacgcagagcgtcgagctgcaaccgggcatgtacgcc
attttggaccccgcgccgttgctgtttcgtgaccgcttggcacgcattcaaaaggagctg
atgctggcgtttggtttctcggcactggtcaccgtgttgctgctgctgatcctgctctac
aaacatgtcatcaatccgattcttcgcctcgataagcagctacaagaagttgagaacaaa
cagcgtaagaacattgaaattctgaacagccaagatgaaatcggccgtctctcttcacgc
ttctacgccatgtataccgagctcgacagcacctatcaacgcaccaaaaccttggcggaa
tacgatcacctgaccaagctggccaaccgccgccaatttcaagtgcaagcggaaaaaacc
ttgctggagacgccgcgaaacagccatatctgggtgctgtatatcgatttggataacttc
aaatacgtcaacgacaaatacggccaccagatcggcgactcgctgctggtcagctttgcc
gagcacgtacgctgcttgtgtgaagcgttcaaccagcagcattacacctatagtttggcc
gcgcgtttgtccggcgacgaatttgcgattgtactctgcgcgccaagccgcaaggccgat
tgcgcgactcagtttgcccagcgcctacttgacccgatgcaaaaacaggacaactcgcca
ctgggacactttccaatcaccgccagtatcggcatcgccacttatccagaagatggccag
cagattgaaaaactgttgcttaacgccgacaccgcgatgtatcaagccaagaacgcgggc
aaaaaccaagtggcttactactcccagcagctcgatgagatcgttcagcgccgcaacacg
attgaacgcgcgttgcgcttggggcattttgatcaagaattcagtttggtctatcaaccg
tatttcacctgctcgggccatcaagtcgctgggtttgaagtgctgctgcgttgggagtcc
gaacagttgggcgacgtctcgccggatgaattcattccaattgctgaacaaaccgggttg
tttggccagattgaccgctgggtgattcagtctgcgtttgctgaactcaacacgctgcgc
gaacaatttacccagccgattcaaatctccatcaacctctcgtcggcagagctagattcc
caacacctggcgcagtttatccaccagcatgcgcagcaacaccaagtggtgccgcgctgg
gtcgactttgaaattactgaaacctttgccgccgactccaagagtttcccgctgctgcat
gagctgtcccgcttgggctatggcttgaccattgacgacttcggttcgggctacacctcc
attgcccaactggtgcagtacccagtgcagaaaattaagttcgaccgcgcatttttggat
acactgatcgccaccaacaaacagaaagtcatcaaacccctgattgacttgtgccactcc
cagcacatgaaagtgaccgcggagggcatcgaaagtgaaacaatgcaccagtggctggcg
aattatcgctgcgattacatgcagggatacttctttgggaaacccatgtcactgagcgaa
gtttgtgcctggcaacaaccgaatgagatgaccccgtcctatgaaaaaagtgatcattgc
ttctcttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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