KEGG T40000: 33133638

Viruses: 33133638

Entry

33133638          CDS       T40000

Symbol

CD917_gp1

Name

(RefSeq) Canine kobuvirus; polyprotein

Virus

1836608 Canine kobuvirus

SSDB

Motif

Pfam:

RdRP_1 Rhv RNA_helicase Peptidase_C3 Calici_coat AAA_16 AAA RdRP_4 AAA_22 AAA_25 DUF356 TsaE AAA_5 Mg_chelatase nSTAND3 RuvB_N

Other DBs

NCBI-GeneID:

33133638

NCBI-ProteinID:

YP_009380518

RS:

NC_034971

Position

NC_034971:602..7936

AA seq 2444 aa
MAGRMESRSARSTVNSFYRLTYITATDYQDFLYLQSFPQMSYPLPKPSYFPCPYCHCDEE
HGFLSPESLCGEGFEPCHRCTNPLPRRKYNIVPPEDWLLDSNVQDWFEPPTFLSDFQQKV
FDKIALLSLPGPFQAKTPEELAILGALKQLLKFPDLPPQRMPLAVNQLKPQGNSVTNIYG
NGNNVTTDVGANGWTPTVSVGVGDAPVSASADQLPGRPGGASSDKAHSSSSSKTTIETGN
RVGSRFSKWWEPAAARALERATDAACDGIEGAGKLAGKAISRKLTGPAPASSTSTPQPGL
AALNPSATQAGNAAILTGSTAPSFLAYPTASSVPLPNPDEPSMPGPSGDRTWLLDTVTWE
QSQEAGWNLAGNNGMLWGALDNPTFPISSSNNWGIEGSGSQAIYPTAYPLPFSFVRAYPD
SPWAAMYNTHSMWNCGWRVQVTVNGSQFHAGALILYLIPEAATKAIESARRNAGFVYPYV
ILNLYESNTATLEVPYISPTPNTSSGLHAPWTSYLQVLSPLNPPTGVPTSLSCSIYVTPI
DSTFHGLRYVAPQHWKTRIVPGAGAFGSAVAGQELPLCGVRAFYPPNDYIPARVHDWLEF
AHRPGLMATLPWTMAEEAGDRLAILPVSPSAIAGTGAPISYVLSLFSQWRGELAAHLLFT
GSAQHYGRLVVCYTPAAPNPPQTMQDAMRGTYTVWDVNAASTLEFTIPFISQSYWKTVDI
FNPDALLSTTGYLSVWVLNPLTGPHSAPASALIQGFLSAGESFNVRFMQNPALTSQANSE
DLNAPQDTANIENGASDNTPQPRTTFEYTENSLPPDSNLENFFSFYRLLPLGSNTQPSIP
VPDGAVARLPLDPLNWQQSADVAGLTAMLSCFTYIAADLRFTLRISNPNGLPTSLLIAYA
PPGATIPQSPDRQTLSNFFMAETPIPMSDTTLISFSIPYTSPLSAIPTSYYGWEDWSGTN
FGVLQAGSWGTLLFLPSYPQQIVQPQPLTITAWVAFGNFKGWVPRAPPPLPPLPTPETNP
EKSVAVVKQGAHTSLGDVDPDDRVYIVRADRPTYVHWALRKVARDGSTKQISLSRDKTTA
VVAYEPLEGELYQEVFPSAWTIAELQLGKPWEYSATHNCTHFVQGATNVELPNTGFSLAL
GVGALALVAASAAGAVQALKGIKRQGLLTLTADADTNRTLTRISESVTQATQAVTNFDLQ
GPANSVTLAASDIREAATRVASSLDGFTDVLHDLKSSLFSRVSDAVEAGVVSFLTWLAKI
FGYLLVLFGSPTPMSISGLLVIICADLAPHARDFFAATGNVLSSLYYWIATKLGFSVTPE
ECEQATLEPQGLKDFNDGALAMRNVEWIGETAWKWAQRILTWIRGKAQTDPQAKLADAHD
EIMMHYSDSILALGTEKPPVEHITTAISRCRELVTIAQDAKSGPHSAFLNQALKNYTLAL
SQHRKRQVGPRPEPVVVYLYGPPGTGKSLLASLLAQTLAQRLSGNPDDVYSPTSASCEYF
DGYNGQVVHFIDDIGQDPEGRDWANFPNLVSSAPYILPMASLEEKGTHYTSRVIVVTSNF
HEPNERAARSMGALRRRVHLRINVTSNGVAFDPVNALNPIPNTTSKYFTAQTPLTLFQAN
VVRLDRDSIWTPSFSNLDELIDAIMARMDRSTGVSNSLASLIKRQGRTITAEPREIPEAY
ADELVEALAHHKPISCSLPLSQAISNNTPLETITNTLWKYRKPIFVATTFLAVVGFLTSI
IPLARSIWQQREDSKSETQAAYSGLPHQKAKPKSAKPIPTRHIQRQGLSPALPGISQNVV
HVESGNGTSKAVMSGFYIFSRYLLVPTHLREPDHTTLLVGTDAYDWATLQTLELGELTLV
HTPTSRQYRDMRRFIGSFPYPTGVLVSQYKAAPLYVRYSDNRVLDMDFPGAIVCKQAYGY
RAATFEGLCGSPLVTDDPSGVKILGLHVAGVVGASGFSAPLHTILPQITQFATTHQSLIV
PTGEVKPGVNINRMSRLHPSPAYGAFPIKKEPAPLKRNDRRLNDGVNLDTQLFLKHGKGD
QTEPWPGLEAAADLYFSAFPTSLPVLTQEQAIMGTPNMEGLDMGQAAGFPWNTQGRSRRS
LFDEPEPGVFVPKPELQVEIDRTLEDPDYVYSTFLKDELRPTAKVKDGLTRIVEAAPIHA
IVAGRMLLGGLIDYMQGRPGEHGCAVGCNPDVHWTEFFYKFADFSQVYDLDYKCFDATLP
SAAFSLVAERLERLTGDPRVSKYIHSIRHSHHIYGNQMYDMVGGNPSGCVATSILNTIIN
NICVLSALIQHADFSPSKFQILAYGDDVIYATEPPIHPSFIRDFYQKYTPLVVTPANKGS
DFPPTSTIYEVTFLKRWFVPDDIRPFFIHPVMDPDTYEQSVMWLRDGDFQDVVTSLCHLA
FHSGPKTYERWCMKVREQCLKSGFAPNFLPYSYLQLRWLNLLAA

NT seq 7335 nt +upstreamnt +downstreamnt
atggcaggcagaatggaatctcgttctgcgcgctccactgtgaactctttctaccgcctc
acctacatcactgctactgactaccaagacttcctctacctacagtctttcccccaaatg
tcttatcccctccccaaaccatcctacttcccgtgtccttattgccactgtgatgaggaa
cacggcttcctttcccccgagtcactctgtggtgaaggcttcgagccctgccacaggtgc
accaaccccctcccccggcgcaagtacaacattgtgccccccgaagactggctcctggac
tccaatgtccaggactggtttgagccccccaccttcctctctgactttcagcagaaggtc
tttgacaagatcgccctgctgtctctcccaggccctttccaagcaaaaactcctgaagaa
ttggccatccttggagctctcaaacagctcctcaaattccccgacctccccccccaacgg
atgccccttgctgtcaaccaactcaaaccccaaggaaactctgtcaccaacatttacggc
aatggcaacaacgtcaccactgatgttggcgccaatggctggacccccactgtctctgtg
ggcgttggagacgctcccgtctccgcgtccgctgaccagctgcctggtcgcccaggtggt
gcttcctctgacaaagcccactcttcctcctcctccaaaaccaccatcgaaactggcaat
cgtgtaggctcccgcttctccaagtggtgggaacctgccgctgcccgcgctcttgagcgc
gccaccgatgccgcctgcgacggcatcgagggagctgggaaactcgctggaaaggcgatt
tcccgcaagctcacaggccctgcccctgcctcctctacctccacccctcagcctggcctg
gctgctctcaatccatctgccacccaggccgggaacgccgcgatcctcaccgggtcgacg
gcaccctcattccttgcttaccccactgcctcctccgtccccctcccaaacccggatgaa
ccatcaatgccgggaccctcaggtgaccgtacctggctccttgacacggtcacttgggaa
cagagccaagaagccggctggaacctggccggcaacaatggcatgctctggggagccctc
gacaaccctacattccccatctcatcatccaacaactggggaatcgaagggtcgggctcc
caagccatctaccctactgcctaccccctccccttctccttcgtgcgtgcgtacccagac
tctccctgggctgccatgtacaatacccactccatgtggaactgtggttggcgcgtgcag
gtcaccgtcaacggttcacagtttcatgctggtgccctcatcctctacctcatcccagaa
gccgcgaccaaagcgatcgagtccgcccgccgcaacgccggcttcgtctacccctatgtc
atcctcaacctctatgagagcaacaccgccactctagaggtcccttacatctcccccact
cccaacacctcctccggtctccatgccccctggacctcctacctacaagtcctctcacca
ctcaacccacccactggtgtccccacctctctttcttgctccatctacgtcacccccatc
gactccaccttccatggcctccgctacgtggcgccgcaacactggaaaacccggatcgtc
ccgggtgccggtgcctttggctccgccgtggctggccaagaactccccctttgtggagtt
cgcgctttctacccccccaatgactacatccctgccagggtccacgattggctcgagttc
gctcaccgccctggacttatggccaccctcccctggaccatggccgaggaggctggcgac
aggctcgccatcctccccgtctccccaagcgccattgctggtactggcgctcccatctcc
tacgtcctctccctcttttcccagtggcgcggtgaactcgccgcccacctcctcttcact
ggatcagcccagcattacggccgtctggtcgtatgctacacccccgctgcccccaaccct
ccccaaaccatgcaggacgccatgcgcggtacctacaccgtgtgggacgtcaatgcagcc
tccaccctcgaattcaccatccccttcatctcccagtcctactggaagacagtggacatc
ttcaaccctgatgccctcctctccaccacaggctacctctctgtgtgggtcctgaatcct
ctcacaggaccccattctgcccccgcttctgccctcatccaaggcttcctttccgcgggc
gaatcctttaacgtccgcttcatgcaaaaccccgccctcacctcccaggcgaactcagaa
gatctcaatgcaccgcaggacactgccaacattgagaatggtgcttctgacaacacacct
cagccacgcaccacctttgagtacaccgaaaattccctccctcctgactccaatctggaa
aatttcttctcattctaccgcctcctccctctcggctctaacacccaaccctccatccct
gtccctgacggtgccgtcgcccggctgccactggatccactcaactggcagcagtcggcc
gacgttgccggtctcaccgcgatgctctcctgcttcacctacattgcagctgaccttcgc
ttcacccttcgcatctctaaccccaatggtctccccacctctctgctgattgcttacgcc
ccccccggtgctacaatccctcagagtcctgaccgccaaacactgtccaacttcttcatg
gcggaaacacccatccccatgtcagacacaactctcatctccttttccattccctacacc
tcccctctctcagccatccccacctcctactatggctgggaggattggtctggtaccaac
tttggtgtcctccaggctggctcctggggcaccctcctcttcctcccctcctatccacaa
caaattgtccaaccgcaacccttgaccatcaccgcatgggtcgcctttggcaacttcaaa
gggtgggtcccccgcgccccacctcccctcccgccccttcccactcccgaaaccaatccg
gaaaaatctgtggccgtcgtcaaacagggagctcacacctccctgggagatgtcgaccca
gatgaccgtgtctacatcgttcgtgcagataggcccacctatgtgcactgggcgctccga
aaggtcgcccgcgatggaagcacaaagcaaatttccctctcccgtgacaagaccactgcg
gttgtcgcctacgaaccgctcgaaggtgaactctaccaagaggtcttcccctccgcttgg
accatcgccgaactccaactcggcaaaccgtgggagtacagtgcaacacataactgtacc
cacttcgtccaaggtgccactaatgtggaacttcccaacaccggcttctcattggctctt
ggagtcggtgcccttgcccttgtcgcagcctcggctgctggtgccgtgcaagcactcaaa
ggcatcaagcgccaaggtctcctcaccctgaccgctgacgctgacaccaaccgcaccctc
acccgcatctcagaatctgtcacccaagccacccaagctgtcaccaactttgatctgcaa
ggtcccgcaaattctgtcactcttgctgcttctgacatccgtgaggccgccaccagggtc
gcttcgtccctggacggtttcacggacgttctccacgatctcaaatcctctctcttctcc
cgagtctcagacgctgtcgaggccggggtcgtgtccttcctcacttggctggccaagatc
tttggatacctcctcgtcctcttcggttctcccacccccatgtccatctctggactcctc
gtcatcatctgtgctgaccttgccccccacgcccgcgacttcttcgccgccaccggcaat
gtcctctcttccctctactactggattgccaccaaacttggcttttcagtaacccctgaa
gaatgtgaacaggcaacccttgagccgcaaggcctcaaggacttcaatgacggtgcactc
gccatgcgaaatgtcgagtggatcggagaaactgcctggaaatgggcccagcggatcctc
acttggattcgcggaaaggcccagactgacccccaagccaaacttgctgatgcacatgac
gaaatcatgatgcattactcggattccatattggccctcggaaccgagaaacccccggtg
gagcacatcaccaccgcaatttcacgctgtcgtgagctcgtcacgatagctcaggatgcg
aaatcaggcccccactctgcattcctgaaccaggccctcaaaaactacacccttgccctc
tcccaacaccgcaagcgccaagtcgggccccgccccgaacccgttgtggtctacctctat
ggaccaccgggcactggcaaatccctccttgcttctctccttgcccaaacccttgcccaa
cgtctgtctggtaacccagacgacgtctactcccccacctcagcctcttgcgaatacttc
gacggttacaatggccaagtcgtccacttcatcgacgacatcggccaggaccccgaagga
cgcgactgggctaacttccccaacctcgtctcttctgccccctacatcctccccatggcc
tccctggaggagaaaggcactcactacacctcccgagtgattgtcgtcacctccaacttc
catgaacccaacgaacgcgctgcgcggtcgatgggcgccctccggcgccgcgttcacctg
cgcatcaacgtcacctctaacggcgttgcgttcgaccccgtcaatgccctcaaccccatc
cccaacaccacttccaaatacttcactgcccagactcctctcactctcttccaagcgaac
gtggtccgcctagaccgcgattccatctggaccccctccttctccaacctggacgagctc
atcgacgccatcatggctcgtatggaccgctcgaccggggtctccaattctctcgcttct
ctcatcaagcgacagggacgcaccatcaccgcggaacctcgcgagatccctgaagcttac
gctgatgaacttgtggaggcactcgcccaccacaagcctatctcttgctctctccccctt
tcacaagctatctccaacaacacccccctggaaaccataaccaacaccttatggaagtac
aggaaacccatctttgttgctaccaccttccttgcggtcgtgggattcctcacctccatc
atcccactggcccgttcaatctggcaacagcgtgaagactccaagtctgaaacgcaagcg
gcatactctggtctgccacaccaaaaagcaaaacccaaatccgccaaacccatccccacc
cgccacatccaacgtcaaggtctttcccctgccctccccggaatctcccaaaacgttgtc
cacgtggagtctggaaatggcacctccaaggctgtcatgtctggattctacatcttctcc
cgctacctccttgtccccacccatctccgtgagcccgaccacaccaccctgctcgtgggc
acagacgcctacgactgggccacgctccagaccctggagcttggagagctcacccttgtc
cacacccccacctcccgccagtacagggacatgcgccgattcatcggctcatttccttac
cctactggtgtccttgtgtcccaatacaaggctgcccccctctacgtccgctactccgac
aaccgcgtactggacatggacttccctggagccatcgtttgcaaacaggcgtacggatac
cgtgctgcgaccttcgaaggtctgtgcggatccccgcttgtcacagacgatccctccggg
gtcaagatccttggcctccacgtggcaggagtggttggcgcgagtgggttctcagccccc
ctccacaccatccttccccaaatcacccaatttgccaccacccaccaatccctcattgtc
cccaccggcgaggtcaaacccggtgtcaacatcaaccggatgtctcgcctccacccctcc
cccgcctacggtgccttccccatcaagaaggaaccggctcccctcaagaggaatgaccgc
cgtctcaacgatggcgtgaacctcgacacccaactcttcctcaaacacggcaaaggtgac
cagaccgagccctggcccggtctggaagctgctgctgacctctacttctccgccttcccc
acctccctccccgtcctcacccaggaacaggcgattatgggcacgcccaacatggagggg
ctcgacatgggccaagctgcgggtttcccctggaatacccaaggccgctcacgccgatcc
ctctttgatgagcctgaacccggtgtctttgtccccaaacctgaactccaagtcgaaatc
gaccgcacgcttgaagatccggattatgtctactccaccttcctgaaagatgaactccgc
cccaccgccaaggtgaaagacggactcaccagaatcgttgaggctgctcccattcacgca
atcgtcgccggtcggatgctcctcggtggtctcattgactacatgcaggggcgccccggt
gaacacggttgtgcggttggctgcaaccccgacgtgcactggactgagtttttctacaag
tttgcggacttctctcaggtatatgatctggattacaagtgtttcgatgcgactctcccc
tcagctgccttctcccttgtggccgaacgactggagcgcctcacaggcgatccccgcgtg
tcaaagtacatccactccatccgccattctcaccacatctatggcaaccagatgtacgac
atggtcggaggaaacccctccggttgtgtggccacttccatcctcaacaccatcatcaac
aacatctgtgtgctatcggccctaatccagcatgcagatttctccccttccaaatttcag
atcctcgcgtacggtgacgatgtcatctacgcaacagaaccccccatccacccctccttc
atcagagacttctaccagaaatacaccccgttggtggtcacccccgccaacaagggctct
gatttcccccccacgtccacaatctatgaagtcaccttcctcaaacgctggttcgttccg
gacgacattcggccgttcttcatccacccggtgatggacccggacacgtacgaacaatca
gtgatgtggttgcgtgatggagatttccaggacgttgtcacctccctctgtcatttggcc
ttccatagtgggcccaagacgtacgagcgctggtgcatgaaagtgcgcgagcagtgcctc
aagtctgggttcgctccaaatttcttaccctactcctacctccaactccgctggctcaac
ttgctggctgcttag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (16)   
   Pfam (16)   
Taxonomy (1)   
   TAX (1)   
All databases (79)   

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