KEGG   Viruses: 911741
Entry
911741            CDS       T40000                                 
Symbol
AlHV1gp22
Name
(RefSeq) Alcelaphine gammaherpesvirus 1; major capsid protein
Virus
35252  Alcelaphine gammaherpesvirus 1
SSDB
Motif
Pfam: Herpes_MCP
Other DBs
NCBI-GeneID: 911741
NCBI-ProteinID: NP_065524
RS: NC_002531
UniProt: O36375
Position
NC_002531:45655..49767
AA seq 1370 aa
MEVCRLENRPLPHAAVEANLLRQVKESAAEGLFKSFQLLVGKDVRENSVRFEVLLGVYAN
VIEFVKFLETGLAASCINTEFRDLKRMVDGKIQFKVSVPTIAHSDGRRPNKQRQYIVMKC
TSKHHISAEIELAIADLENMHMEPETDLDMLEYIGTVKTVTSALQFGIDALERGLIDTVL
SVKLRHAPPLFILQSLSDPTLTERGLKKSIKSDLVSMFKDHLITHSFFINKAEALATPRQ
YILGMLSSIINSVSKETVFKGTSTYTTSSGEPVAGVIETTDAILNKLLTLLGEYKTEVVG
PAAYASYVVRGENLVTAVSYGRAMRSFEQFKNKLVDDPVGQAGSLDKNADSDNEYSSLPQ
TTIPVSVVKVGSQPVIVESIQKMYNEAQAPFPLNRRMQYTYFFPLGLFIPRPKYTTSTSV
KLEDDSCLSSEVWVVNKTNTPLCFNYQNALRTLCHPRVNSPSACLQELQRSNLADNALEA
FRDGLRSRPMDNMNLFAHVRRFYLKRTEVVLLPIAQKCNLSTDDLLHPTNHKLLQLELHP
LFDFVVERVAAEEAAFRATHRTFSGNIPQPLAPNQFQDSRGKQFEAATSLQHAVDDATLE
VIRSTAFDPTYPFICYIVEAMIHGQPEKFTMNIPFISLCINTYWDNSGNLAFINSFFMVK
NICTHMGGGLINRDAYALYRKILGEVVAIKHAIVRMCGAEQLGNNELQGYVNGLLDRQLL
PPFAYRDTFAQLDNRGARFVIGAKEHDNSQAFVHALPDFENANQVAPAMYHTRNTFNWDT
FEYITVSNGNNDADAADLEKIYYYVMLPVCTNGHMCGMGADFENIAIVLGYNIPVFDIPQ
FNGDDTVLEHLENGPLRDILIASEVNPTADMLRMMIVSYLNCPQMTQVVRVKTRRDHCQN
LGPEQGAIIEHTVMVNGFVCFGIPERMKQVAKNMFYPVPFHRFYCDPLVAGSWDNHIQNY
VMNNFSQRSLEAFNAPPGIMADYAEWHKAPMAKYITSCKASTASLSAFTVMHNKLSPIAF
IVQAKHKIHPGFALTVLRTDEVLAENVMFSARASTSVFVGRPTVSRREVRADAVSFEVNH
ELATIETGLSYSSVVTPAHVASITTDMGIYCQNLFSIFSNEIYDHADVNNYVARKIGVED
AVNRHNPRALIAGVGQISHPPGLVHGQYATCEVIPTPVTADVAYFQKSNSPRGRASCVVS
SDINNQERAEQFLYDHSLPDPAYEYRSTVNPWASQKGSLGDVLYGSRYRQVSSPGIYSPS
KPFFNKEEMLKNNRSFYTLVNEYAQRLAGYAATSCTDLQYVVINGTDVFLEQPCLFLQEA
FPTLSASHRVLLDEYMSFKNTHAPVHMGHYFIEEVAPVKRVFKIGNKVAS
NT seq 4113 nt   +upstreamnt  +downstreamnt
atggaggtgtgtcgcctagagaatcgcccgctgcctcacgcggcggtagaggcgaaccta
ctgcgtcaagtgaaagaaagtgccgccgagggactgtttaagagcttccagctgctcgtg
gggaaggatgtgcgtgaaaacagtgtgcgctttgaggtgctacttggggtgtatgccaat
gttattgaatttgtgaaatttctagagacggggttggctgcatcctgtatcaacacagag
tttagagatctaaaacggatggtggatggaaaaatacagtttaaagtttctgtcccaact
attgcacacagtgatggacggcgccccaacaagcagaggcagtacattgtgatgaaatgt
accagcaagcaccacatcagtgctgagatagagctagccattgccgacttagaaaacatg
cacatggagcctgaaacagatctagacatgctagagtacataggtactgtaaaaaccgtt
acatcggctcttcagtttggcatcgacgccctggaacgcggcctgatagacacggtgctc
tccgtcaagctgcgccacgcccctcctctgtttatactacagtccctcagtgaccccact
ctgacagaacgaggcctaaaaaagtccattaaatctgatttggtctctatgttcaaggac
cacctgataacacactcatttttcatcaacaaggcggaggcgctagccactcccaggcag
tacattttgggcatgctctcctccatcataaattctgtttccaaggaaacagtctttaaa
ggcacctctacctatactaccagttctggggaacccgtggctggggtaatagaaactaca
gatgccatcctcaacaagctcctcaccctactgggggaatacaagacggaagtggtaggt
cccgcggcctacgcatcctacgtggtgaggggggaaaacttagttactgctgtcagctat
gggcgtgctatgagatcctttgagcagtttaagaacaagctggtggatgacccggtaggc
caagccggatccttagacaaaaatgctgattcagataatgagtacagctctttaccgcag
accaccattccagtttcggtggtgaaggtgggaagccaacccgtgattgtggaaagcatc
caaaaaatgtataatgaagcccaggcaccattcccactcaacagaaggatgcaatacacg
tactttttcccactaggactctttatcccacgacccaagtataccacgtccacttcggtg
aaactggaagatgattcttgcctatcctcagaagtatgggttgtaaacaagacaaacacc
cccctgtgtttcaactaccagaatgccctccgaactctatgccaccccagagtcaacagc
cccagcgcctgcctgcaggagctccagcgctcaaacctagcagacaatgccctagaggct
ttccgggatggcctgagatccaggcccatggataacatgaacctgtttgcccacgtgagg
aggttctatcttaagaggactgaggtggtcttgctacctattgctcaaaagtgtaacctc
tcaacagatgatctcctgcaccccacgaaccacaaactattgcagctggaactgcatccg
ctttttgactttgtggtagagcgggtggctgccgaagaggcggccttcagggctactcac
agaactttctctggaaacataccccaaccactggcccccaatcagtttcaagactctagg
ggaaagcagtttgaggcagcaactagcctgcagcatgcggtagacgatgccactttggag
gtgataaggagcacggcatttgaccccacctatccattcatctgctacatagtggaagcc
atgatacacggacagccagagaaatttaccatgaacatacccttcatttcattatgtatt
aacacctactgggataattcaggaaacctggcattcatcaacagctttttcatggttaag
aacatctgcacacacatgggaggtggactgatcaacagggacgcgtatgctctctacagg
aagattttgggagaagttgtggctattaagcatgccattgtgcgcatgtgtggtgcggag
cagctgggaaacaacgagctacagggatatgtcaacggcctcctggacagacagctactc
ccaccatttgcatacagggacacctttgcccagttggacaacaggggtgccagatttgtc
attggggccaaggagcatgataacagccaggcttttgtacacgccctaccagattttgaa
aatgccaaccaggtagccccggccatgtaccacacccgcaacacttttaactgggacacg
tttgaatacattacagtctcaaatggcaacaatgatgcagatgcagcggatttagaaaaa
atctactactatgtgatgctgccggtgtgcaccaacgggcatatgtgtggtatgggggcc
gactttgaaaacatagccatagtgttgggctacaacatacccgtgtttgatatcccacag
ttcaacggggatgacactgtcctcgaacatctagaaaacgggccccttagagacatcctc
attgcctcagaggtgaaccctacagcagatatgttgaggatgatgattgtttcctacctg
aactgtccccagatgactcaggtggtgagggttaagactagaagggatcactgtcaaaac
ctgggccccgaacagggtgccattattgagcatactgtcatggtcaacgggtttgtgtgc
tttggaatcccagaaaggatgaaacaggtggccaagaacatgttttacccagtgcccttt
caccggttttattgtgacccactggtagcagggagttgggacaaccacatccagaactat
gtcatgaacaacttctctcagaggtctcttgaggccttcaacgccccacctggaatcatg
gcagactatgccgagtggcacaaggcccccatggctaaatacatcacttcttgtaaagcc
tctacagcctcactaagtgcattcaccgttatgcacaataagctctctcccattgccttc
atagtgcaggcaaagcacaagattcatcccgggtttgccctgacagtgttgcgcaccgac
gaagtcttggctgaaaatgtcatgttcagtgcccgggcctctacgtccgtctttgtgggc
aggcccaccgtcagtcgccgagaggttagagcagatgcagtcagctttgaagtaaaccat
gaactggctactatagagacgggcctgagctacagcagcgtagtgaccccggctcatgtg
gcctccatcaccacagacatggggatttattgtcaaaacctcttttccatcttttccaat
gaaatttatgaccatgcggacgtgaacaactacgtggctagaaaaattggcgtcgaggat
gctgtgaacaggcacaatccccgggccctgattgccggggtgggccagatatctcacccg
ccagggctggtacatggacagtatgccacttgtgaggtgattccaacaccagtgacggcc
gatgtggcctattttcaaaagtcaaacagtccaagaggtagggcttcgtgtgtggtgtcc
agtgatatcaacaaccaagaaagggcagagcaattcctctacgaccactctctgccagac
ccggcctacgagtacaggtctactgtgaacccctgggcctctcaaaaaggctctctgggg
gatgtgctatatggttctaggtacagacaagtctcttcccctggaatctacagcccctca
aagccattctttaacaaagaagagatgctgaagaacaacaggtctttctatactctagtt
aatgagtatgcccagaggctcgctggctatgcggccaccagctgcactgacctacagtac
gtggtaatcaatggcacggatgtgttcttagagcaaccttgcttattccttcaagaggcc
tttcccaccctcagtgcctcccaccgtgtactcttggacgaatacatgtcatttaagaac
acccacgcaccagtgcacatgggccactattttattgaagaagtggccccggtaaaaaga
gtatttaagattggcaacaaggtcgcctcttag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
Taxonomy (1)   
   TAX (1)   
All databases (8)   

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