KEGG   Viruses: 921337
Entry
921337            CDS       T40000                                 
Symbol
PVCVgp1
Name
(RefSeq) Petunia vein clearing virus; ORF I polyprotein
Virus
59504  Petunia vein clearing virus
SSDB
Motif
Pfam: RVT_1 RT_RNaseH_2 RT_RNaseH MP zf-CCHC RVP
Other DBs
NCBI-GeneID: 921337
NCBI-ProteinID: NP_127504
RS: NC_001839
UniProt: Q91DM0
Position
NC_001839:51..6590
AA seq 2179 aa
MTSPSDYQSNSSLATTYSNAPKLSKALSNKYDYLYEVDILKENQKISDTYLPLLNPYSAF
AKRSVTPWSQIRSLVQSKPRHVKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSH
QFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLF
PNFTMSLSDANLSTALKIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMDLTLPGGEEAL
FLKIDAGSGATQCTQVPRQLSKEDLIKILPDSWVTNYEKLREPEEPLRSTEVSMSKRHDK
SVAISFDHSHYKKLRNTHHFMGMISDDVIVLDDPETFSKTLPSLMQTHDWIHHFQLDGRA
VSWYKDPFDGHCPWDIDCQCYSCLYSEDEEDFEDGFPTKYKGIPRPGSIAERKMQEEANL
KKLYEEKDPFVGSLSRPGKYEYLVRYDAPSWAKDPHLTVEPTGWDSDEPIPPKQPFTTRN
TLPKIYMFNPLNYENNFPPLSSFSKDGADHTPKIPKRNVVLPSGAKDPTGDLEATVNWQT
ENALAQNRMLTTIDRTLKETVTKVDRVTDQSSKNQGLIKVLEQQLQDLNKRICPPGTSLF
HFFDQQKSEMASLKEQIRLLKEQPQKNETDTPSYQSSYQPFHSFSSPYMPSNPPNSPFTT
FANTPQPQPSLFSQYPIQPKSPNTFDLAKLVWEKKDAIAAEKRAKKKLQKDEVKQKTSLP
PESKRPDPQSSSHLGDQFMISDPALPKVYALNEPSVPSEDTSSQSYISTEESVEDTDSFS
VVSEESTQLSQLSSSSNDSPENNENTLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERRP
EITPPKMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLVEREPFLILSEFTARLSGT
LREWWNSVGPDDKNRFLTSQDFTWNIRILYSYFCGDQSQNKEELRRQIFEMKCLSYDRKK
IDRHFQRMIKLFYHIGGDISLKQAFISSLPPILSERISALIKERGTSVTQMHVGDIRQTA
FYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKGCSGYCNPSRRRKYKRFKLPS
FKERDGRQYRKRRRFFRRSKTSKAMRQKPRSCFTCGKIGHFSRNCPQNKKSIKLISEIQK
YTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPPLPKIHTI
VEIPQTEVKIYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDGILT
TTVKTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQF
KRYTEIPRLFQLTTSNELQQLEDVIKNQLCADSHVDFLSKCSHPLWLNQDFFIQLPFKKN
ENINPTKASHSGMNPEHLQLAIKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLR
LVINYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFC
IPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQ
FISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQ
QFLGIVNYIRDFIPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIPSE
GKKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKF
NFFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGKDNILAD
FLSRPHEFSQRLKNSPKVLMFQRRTRSSSTKSKADSSQSTGSSYKLSHNLPENPPEVFNL
DYPWDTSVFLERRTFYELQVFKKYGGSILRPFGVDPEYPFAHIFIPNPTDFSEDLLWMFW
YLLNHFHILMKFRCSKFSKIDQVNPWMLKFLLWFNNHNYWASLFKCMKGIKKYVVIWFYR
PVNYYQGKLCALPHSSIVKWNHVSVLNDEDEYSELQRFIFQENKCIPKEIWPGSSGSWNY
GNSDHPHGQWIRDALREYREMNDYFQDAQDPYPAYSKVDLTQEELNTLRITRSYGSSSED
ADMVKRSIYTVQSNIVKDSPRKRKGKAKSRSSTRSEKRRAKNKCKYRSLHGEDWWIELGY
STKPSTPSWTQDSSSEPCV
NT seq 6540 nt   +upstreamnt  +downstreamnt
atgacttctccttctgattatcaatccaattcctctctggctaccacttattctaatgca
cctaaactctctaaagctttgtctaataaatatgactacctttatgaagtagatatcctt
aaagaaaaccaaaaaatatcagatacctatcttcctttgttaaatccttactctgctttt
gcaaagagatccgttaccccttggtctcagatccgttcattagtccagtctaagcctcgc
catgtgaaagaatatgttgctgcttccaaattagatcagcatcctgtctttgctacagga
gaagaacagtttgttactctacatattccagaagaatttgcttctcactggaaatcccac
caattcactcatatccactttggtgctgttaaaattgcccttacctaccatggaagaaag
ggtcaacctgttgttgccagattagcactcttagatactagatatcttgaataccaacat
gctaatcttggaactgctgaaatcactctcaatgcaggcacagtcttcattactctcttc
cctaactttaccatgtctttatcagacgccaatctgtccacagccttaaaaatccaagtc
caaatccaaggagctccccttacaaaagactccatccaggcaactttacattaccaaatt
gcttggcgtgtccaaaatcatgctatggatttgactctccctggaggtgaggaagccttg
ttcctcaaaattgatgccggaagtggagccacccaatgtacccaagtccctagacagttg
tcaaaagaagatctaatcaaaatattgcctgattcttgggtaacaaattatgaaaagtta
agggaaccagaagaacctctccgttccactgaagtctcaatgtcaaagagacatgataaa
tcagtagctatcagttttgatcattcccattataagaagctcagaaacacccatcacttc
atgggtatgatttcagatgatgtcattgtcttggatgatcctgaaactttttccaaaact
cttccatctctcatgcaaactcatgattggatccatcatttccaacttgatggacgtgct
gtatcatggtataaagatccttttgatggtcattgtccatgggatattgattgccaatgt
tattcttgtttatacagtgaagatgaagaggattttgaagatggatttcctacaaaatac
aaagggattcccagaccaggaagtattgctgaaagaaagatgcaagaagaagctaatctc
aagaaactttatgaggagaaggatccttttgtgggatcattgagcaggccaggcaaatat
gagtatctcgttagatacgatgccccatcttgggccaaagatcctcatctgacagtggag
ccaacaggttgggatagtgatgaaccaattccacctaagcaaccattcacaaccagaaat
accttgccaaaaatttacatgttcaacccactcaattatgaaaacaactttccacctttg
tcatcattttctaaagatggtgcagatcatactccaaaaattccaaagagaaatgttgtt
ttaccatctggtgcaaaagacccaactggtgatcttgaggcaactgtaaattggcaaaca
gaaaatgctttggctcagaataggatgttaacaaccattgataggaccctcaaggagact
gtaaccaaggttgatagagtcacagatcagtcctcaaaaaatcaaggtcttatcaaagtt
ctcgaacaacagctccaagaccttaacaagaggatatgtcccccaggaacatccttattt
cacttctttgatcaacaaaagagtgaaatggcatcccttaaagaacaaatcagacttctc
aaagaacaaccacagaaaaatgaaactgataccccatcttaccagtcctcatatcagcct
tttcacagtttctcttccccatatatgccctcaaatccgcctaactcaccgttcacaact
tttgcaaatactccacaaccacaaccttctcttttttctcaatatccaatacagccaaaa
tccccaaatacctttgacttagccaaactagtctgggagaaaaaagatgcaattgctgca
gaaaaaagggccaagaagaagctacaaaaagatgaggtaaagcaaaaaacttctttacct
ccagaatcaaaaaggccagatccccagtctagcagtcaccttggtgatcagttcatgatt
tctgatccagctttaccaaaagtttacgcgctgaatgaaccttcagttccttcggaagat
acatcctcccaatcatacatcagtactgaggaatcagtagaagacacagactctttctct
gtagtctcggaagaatcaacccaactttctcaactctccagttcttctaatgattcacca
gaaaacaatgaaaatacactacctcagacctttatggttcgtccaactgaaccggaaata
tctgaagttgaagatgaggtagatggtatgactgaggaaccaattcctgaaagaagacct
gaaatcactccacctaagatggttggcacaggctttcacactttcagcctagatgatatt
tccattaccaaatggcctgaaagaattcaggatttccacacatggatgctcactaaacaa
ctggtggaaagagaaccattcttaatcctgtcagaattcacagcaagattgtcaggaaca
cttcgagaatggtggaattctgtaggaccagatgacaaaaacaggttcttgacttctcaa
gacttcacatggaatattagaatactttattcttatttctgtggagatcaaagtcaaaac
aaggaagaactcaggagacaaatcttcgagatgaagtgtttgtcttatgacaggaagaaa
atagatcgtcatttccaaagaatgatcaagctcttttatcacattggaggagatatttct
ttaaagcaagccttcatatcttcccttccccccattttatcagaaaggatctctgccttg
ataaaagaaaggggtacttcagttacacaaatgcatgttggagatattaggcaaacggct
ttttacgtccttgatgatctctgtagcaaaagaaaattcttcaaccaaatgaagaagatg
tctagagatctggaaaaagcatgcaccaaatctgaccttattattaagggtgataaagga
tgttcaggctattgtaatccttcaagaagaaggaaatacaagcgcttcaaacttcctagc
ttcaaggaacgagatggcaggcaatacaggaaaagaaggaggtttttcagaagaagcaaa
acaagcaaggcaatgaggcaaaagcctagatcttgttttacatgtgggaaaattggtcac
ttctccagaaactgcccccaaaacaagaagtcaataaaattgatttctgaaatccaaaag
tatactggaattgatattgaagatgacctggagtccgttttctcaattgaggatgaaccc
agtgaggatacattattctcgctagagttttatgaagaatatgcaggagagcaataccag
atcacttcttatgaagctccaaaaacagaaaaccccccattgcctaaaatccacaccatt
gttgaaataccacaaacagaggtcaagatctacacctctaaatgggataagcctatctca
gtcattgctttttatgatacaggagcggcctattcaattatggatccagcaattcttcca
tctgaatattggattccgcatttcaggcactttggaacggctgatgatggtattttgaca
accacagtcaaaaccaagcatcccattacaattgaattcttcccaggcttcaagtacact
acaaaattgttgggatcagatattcctggaaaagatctgctcattggatttgatatctac
agacagcttaataataagcttcgcattggagcagatggaatcagatggaaaaaccagttc
aaaaggtatactgagataccacgacttttccagttaacaacaagcaacgagcttcaacag
cttgaggatgttatcaaaaatcaactctgtgcagattctcatgttgatttcctcagcaaa
tgttctcatccattatggcttaatcaggatttcttcatccagctcccctttaaaaagaat
gaaaacatcaatcccacaaaggcaagccattctggaatgaatccagaacatctccagtta
gcaataaaggaatgtgatgagcttcaacaatttgatctaatcgaaccctctgattcacaa
tgggcatgtgaagctttttatgtcaacaagaggtcagagcaagtgagaggaaaattaagg
ttagtcataaattatcaaccattaaaccatttcctccaagatgacaagtttcccattcca
aataagctcacactcttctctcacttatccaaagcaaagctcttttcaaagtttgatctt
aagtcaggattttggcaattaggaatccatcctaatgagagaccaaaaacagggttttgc
attcctgatagacattttcaatggaaggtcatgccattcggtcttaaaacagccccttct
ttgttccaaaaagccatgatcaaaatcttccagcccatccttttttcagctttggtctac
attgatgatatccttcttttttctgaaacactggaagatcacataaaattgcttaaccag
ttcataagtttggttaaaaaatttggagtcatgttatcggcaaaaaagatgatccttgct
caaaataaaattcaattcttaggaatggattttgctgatggaactttttcacctgctggt
cacatctctttggaactccaaaagtttcctgatacaaatctctcggtaaagcagatacaa
caatttcttgggattgttaattatatcagagattttattccagaggttactgagcatatt
tcccctcttagtgatatgctaaagaagaaaccaccggcatggggaaaatgtcaagacaat
gcagtcaagcaattgaagcaactggctcaacaagtcaaatcattacacatcccttctgaa
ggaaagaaaatacttcaaactgatgccagtgatcagtattggagcgctgtactattggaa
gaacataatggcaaaaggaaaatctgtggatttgcaagtggaaaatttaaggtctctgaa
caacattatcactccacattcaaagagatccttgctgttaagaatggaattaaaaagttt
aatttcttcttgatccataccaactttttggtcgaaatggacatgagagcatttccaaag
atgatcaggttaaatcctaagattgttcctaattctcagttgctacggtgggcacaatgg
ttttctccctaccaatttgaggtaaaacatttaaagggaaaggacaatatccttgctgat
ttcctatcaaggccacatgaattttcacaaaggcttaagaattcacccaaggttcttatg
tttcaaaggaggacaagatcaagctcaacaaaaagcaaggctgactcaagccaaagtaca
ggatcaagttataaattatctcataatcttcctgaaaaccctccggaagtttttaatcta
gattatccatgggatacgtctgtttttctagaaagaagaacattctatgaactacaagtt
ttcaagaaatatggaggatctattttaaggccttttggagttgatccagagtatccattt
gctcacatctttatacctaatcctacagatttctctgaagatttattatggatgttttgg
tatctgctcaatcatttccacatcctcatgaaattcaggtgtagtaaattcagcaagatt
gatcaagttaatccatggatgttgaagttcttattatggttcaataatcataattattgg
gcttcattattcaagtgcatgaagggaataaagaaatatgtagtaatttggttttacaga
ccagtaaattactaccaaggcaagctttgtgctttaccccattcaagtattgtgaagtgg
aatcatgtctccgttttaaatgatgaagatgaatactctgagctacaaagattcattttt
caagagaacaagtgtattccgaaagaaatatggccaggatcctcaggcagttggaattat
ggaaattcagatcatcctcatggccaatggattagagatgcacttagggaatatcgagaa
atgaacgattactttcaagatgcacaagatccatatcctgcttattctaaagttgatctc
actcaagaagaactaaacaccttacgtatcacgcgatcgtatggtagtagttctgaagat
gcagatatggtgaaaagaagtatttacacagtccaatccaatatagtcaaggattctcca
agaaaaagaaaagggaaagcaaaatcaagatcatccaccagaagcgaaaaaagaagagct
aaaaacaaatgcaaatatcggagtcttcatggagaagattggtggattgaattgggatat
tctacaaagccatcaaccccctcatggacacaggacagctcatcagaaccatgtgtctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
Taxonomy (1)   
   TAX (1)   
All databases (72)   

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