KEGG   Variibacter gotjawalensis: GJW-30_1_01083
Entry
GJW-30_1_01083    CDS       T05320                                 
Symbol
uvrD_1
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vgo  Variibacter gotjawalensis
Pathway
vgo03420  Nucleotide excision repair
vgo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GJW-30_1_01083 (uvrD_1)
   03430 Mismatch repair
    GJW-30_1_01083 (uvrD_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vgo03400]
    GJW-30_1_01083 (uvrD_1)
Enzymes [BR:vgo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GJW-30_1_01083 (uvrD_1)
DNA repair and recombination proteins [BR:vgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GJW-30_1_01083 (uvrD_1)
   MMR (mismatch excision repair)
    Other MMR factors
     GJW-30_1_01083 (uvrD_1)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 bPH_6 AAA_12
Other DBs
NCBI-ProteinID: BAT58557
UniProt: A0A0S3PRN4
Position
complement(1134963..1137083)
AA seq 706 aa
MGESATIDGNAGIREPKAAPAYLAGLNPAQRHAVEYGGAGEHGSGVFDPPLLIIAGAGSG
KTNTLAHRVAHLIVSGADPRRMMLLTFSRRAATEMQRRVERITAKVLGPAAGAMTDALAW
SGTFHAIGARLLREYATDLGIDVDFTIHDREDSADLMNLVRHDLGFSKTVKRFPTKHTCL
SIYSRAVNATSPLGEVLGTFFPWCAEWESELQSLFAAYVATKQKQNVLDYDDLLLYWAHM
MMEPALAGQLSDRFDHVMVDEYQDTNRLQSSILLNFKPTGQGLTVVGDDAQSIYSFRAAT
VRNILDFPAHFSPPAALITLEQNYRSTQPILAAANAVIDLASERFTKNLWSNRASGDLPA
LVSVADDNAQAGYVADCVLANREAGLRLKAQAVLFRTSSHSATLEVELTRRNIPFVKFGG
LKFLESAHIKDLLALLRWSQNLRDRVAGFRVAQLLPGFGPGMAAKLLDAIEGGARPIRGL
NAFRPPTAAAEHWIDFCATIKALHLGKAGWPADLDLASRWYVPLMQHRFDDAPQREGDIA
QLAQIASSYPTRERFLTELTLDPPDATSDQAGPPLLDEDYLILSTIHSAKGQEWDSVFVL
NAVDGCIPSDLGVGTTAEIDEERRLLYVAMTRAKDQLHLMLPQRFYVHGQRSMGDRHIYA
QRTRFIPNALTHHFQSRSWPAAQANASLRRPISPLDVRGKLRGMWG
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgggggaatctgcaacaatcgacggaaacgccggtattcgggagccgaaggccgctccg
gcgtatctggccggcctcaacccggcacaacggcatgcggtcgaatacggaggcgccggc
gagcacggcagcggcgtcttcgacccgccgctgctcatcatcgcgggcgcgggttccggc
aagaccaacacgctggcgcatcgtgtcgcgcatctgatcgtgtcgggtgccgatccgcgg
cgcatgatgctgctcaccttttcgcggcgcgcggcaaccgagatgcagcggcgcgtcgaa
cgcatcacggccaaagtcctcggccccgccgccggtgcgatgacggatgctctcgcctgg
tcgggcacattccacgcgataggtgcacgcctgctgcgcgaatatgcgaccgatctcggc
atcgatgtcgatttcacgattcatgatcgggaagattccgccgatctcatgaatctcgtc
cgccacgatctcggcttctcaaaaaccgtgaagcgatttccgaccaagcatacctgcctc
tcgatctactcgcgcgccgtcaacgcgacgtcgcccctcggcgaggtgctcggcacgttc
tttccctggtgcgccgaatgggagagcgaactgcagagcctcttcgcggcctatgtcgcg
acgaagcagaagcagaacgtcctcgattacgacgatctcctgctctactgggcgcatatg
atgatggagccggcgctggcgggacaattgtcggatcggttcgatcacgtgatggtcgac
gagtatcaggacacgaaccgtcttcaatcgtcgatcctgctcaacttcaaaccgaccggg
caaggcttgacggtggtcggcgacgatgcccaatcgatttactcgtttcgcgccgcaacg
gttcgcaatattttggatttcccggcgcacttctcgccgcccgccgcgttgatcacgctc
gagcagaattatcgctcgacgcagccgatcctcgccgccgccaacgcggtgatcgatctt
gcgtcggagcgtttcaccaagaacctatggtcaaaccgcgcgtccggcgatttgccggca
ctggtgtccgtcgccgacgacaacgcgcaggccggttacgtcgcggactgcgtcctcgcc
aatcgcgaggccgggcttcgcctgaaagcgcaagcggtgctgttccgcacgtccagccat
agcgcgacgctcgaagtcgagctcacccggcgcaatattccgtttgtcaaattcggcggt
ctcaagtttctcgaatccgcgcatatcaaggatctgctcgccctgctccgctggtcgcag
aatctgcgtgaccgtgtggcggggttccgcgttgcgcagctgctgccgggcttcgggccc
ggcatggccgcaaagcttctcgatgcgatcgaaggcggcgcacggccgatccgcggcctc
aatgcgtttcgaccgccgaccgcagcagccgagcattggattgatttttgcgcgacgatt
aaagcgttgcatctcggcaaagccggatggccggccgatctcgacctagccagccgctgg
tatgtgccgctgatgcagcaccgcttcgacgatgcgccgcaacgcgaaggcgacatcgcg
cagcttgcccagatcgcatcaagctacccgacgcgcgaacgctttctcaccgagttgacg
ctcgatccgcccgacgcaacgagcgatcaggccgggccaccgctgctcgatgaggattat
ctgatcctgtcgacgatccattcggccaagggccaggagtgggactcggtcttcgtgttg
aacgcggtcgacggctgcattccgtccgacctcggcgtcggcaccacggccgagatcgac
gaggagcggcgcctcctctatgtcgcgatgacacgcgcgaaggatcaactgcatctgatg
ctgccgcaacgcttctacgtgcatggccaacgcagcatgggcgaccggcacatttacgcg
cagcgaacgcgcttcattccaaatgcgctgacgcatcattttcagagccggtcgtggccc
gccgcgcaggcaaatgcttctctccgccgtccgatcagcccgctcgacgtgcgcggcaag
ctgcgcggcatgtggggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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