KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_00952
Entry
VIBHAR_00952      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
vha  Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:vha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vha03009]
    VIBHAR_00952
Enzymes [BR:vha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VIBHAR_00952
Ribosome biogenesis [BR:vha03009]
 Prokaryotic type
  rRNA helicases
   VIBHAR_00952
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 AAA_11 UTP25 AAA_22 AAA_30
Other DBs
NCBI-ProteinID: ABU69951
UniProt: A7MXM0
Position
I:complement(957108..958331)
AA seq 407 aa
MIRTFAELDLDQNLLEAIDEMGYERPTKIQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARILILTPTRELAMQVADQARALAKNTKLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLREYIDAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTLLFSATLEGKGVEGFTADLLNEPAEIDAKSPLRERKKIAQWYHRADDAEHKLALLKH
IITEQAERTIVFLKTRERLAELRAQLESAQIPCSWIQGEMPQDRRNNAISRFREGTVNVL
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFVKEMRPKHKKPVFKKKKKKDDKKKVAKKKTAKKK
NT seq 1224 nt   +upstreamnt  +downstreamnt
gtgatcagaacctttgctgaacttgatctagaccaaaacctacttgaagccattgatgag
atgggctacgaacgcccaactaaaattcaggcagaagcgattccacaagcgttggatggt
cgtgacattctagcgtcagcaccaactggtacaggtaaaacggcagcgttcgtcctgcca
gcactgcaatacctgcaagattttccacgtcgtaaaccgggacctgcacgtattctgatc
ctaaccccaactcgtgaacttgcgatgcaggtagcggatcaagcgcgtgcactagcgaaa
aacaccaagctaaacatcttcaccatcacaggtggtgttcaataccaagaacacgcagac
atcctagcaaccacacaagacatcgtagtagcaacaccaggccgtctacgtgaatacatc
gacgcagaacgttttgactgtcgtgcgattgaatggctaatccttgatgaagcagaccgc
atgctagacatgggctttgcgccaacggttgaccgtctgtctaacgaatgtcgctggcgt
aaacaaacccttctgttctcagcaacactagaaggtaaaggcgtagaaggtttcacagca
gacctactaaacgaaccagcagagatcgacgcgaagtccccactgcgtgagcgtaagaag
attgcacagtggtaccaccgtgctgatgacgctgagcataaacttgccctactaaaacac
atcattacagagcaagcagaacgcactatcgtgttcttgaagactcgtgagcgtttagca
gagctccgtgcacaactagagagcgcacagattccatgttcttggattcaaggtgaaatg
cctcaagatcgtcgtaacaacgcaatctctcgcttccgtgaaggcacagttaacgtgcta
ctagcgacagacgtagcggcgcgtggtatcgaccttccagacgtatcacacgtaatcaac
tatgatatgccacgcacggctgacgtataccttcaccgtatcggccgtacggctcgtgca
ggtaagaaaggtaacgctatctcaatcgtagaagcacacgaccaaccaatgatggatcgc
gttgctcgctacgtaaaagaagacatcaaagagcgtttcgtgaaagagatgcgccctaaa
cacaaaaaacctgtgttcaagaagaaaaagaaaaaagacgacaagaagaaagtagcgaaa
aagaaaaccgctaagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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