KEGG   Vibrio harveyi: AL538_03930
Entry
AL538_03930       CDS       T04380                                 
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
vhr  Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vhr03009]
    AL538_03930
Enzymes [BR:vhr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     AL538_03930
Ribosome biogenesis [BR:vhr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AL538_03930
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF3603 Cupin_2 Cupin_3 Orexin
Other DBs
NCBI-ProteinID: AMF96942
UniProt: A0A3A1PYW0
Position
1:complement(815477..816421)
AA seq 314 aa
MSEIRTKVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTVEKKEDDVAPSTKLNKVAELEHMIIFEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVKKFYFAL
VMGEWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFDQATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTGQVGLDRLFLHAANIKFQHPSNDEWMEINAPM
EARLEKVLAGLRKK
NT seq 945 nt   +upstreamnt  +downstreamnt
atgagcgaaataagaacaaaagtccagttcgttgatatcgacgaagatatggcaggtcaa
cgcattgataattttctgcgtaaccaattaaaagatatccctaagagcatgatttaccga
atcgtgcgtaagggggaagtgcgcgttaacaaaaagcgtattaaagccgagtacaaactc
aaggctggcgatctcgtacgtattccaccagtaacggtagagaaaaaagaggacgacgtt
gcgccaagcactaagttgaacaaagtagcagagctagaacatatgatcatttttgaagac
gatcatatgctgattctaaataagccctctggtacagctgtgcatggtggcagtggtctt
aaatttggtgctatcgaggcacttcgtgcgttacgtccgcaagctcgcttccttgaactt
gttcatcgtatcgaccgcgatacttctggtattttattggtggctaagaagcgttcagca
ttgcgccatctgcaagcgcaatttcgcgaaaagaccgtgaagaagttctactttgccctt
gtgatgggggagtggaaaagcagctgtaaggtcgtgaatgcgccgctacttaaaaacgaa
gtgaatagcatcgtgcgtgtgaacccaaatgggaagccgtcagaaactcgattcaagatt
ctggaaaagtttgaccaagcaacgcttatccaagctagcccaattaccggtcgtactcac
caaattcgtgtgcatactcaatacacgggtcacccaattgcatgggatgatcgctacggc
gaccgtcgcttcgatgcttacactgggcaagtgggcttagaccgtttgttccttcatgca
gcgaacatcaagttccagcacccatcgaatgatgagtggatggaaatcaatgcgccgatg
gaagcgagattagagaaagtactcgcaggtctgcgtaagaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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