KEGG T04596: BKP57

Virgibacillus sp. 6R: BKP57_10525

Entry

BKP57_10525       CDS       T04596

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

vig Virgibacillus sp. 6R

Brite

KEGG Orthology (KO) [BR:vig00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vig03032]
    BKP57_10525
   03400 DNA repair and recombination proteins [BR:vig03400]
    BKP57_10525
Enzymes [BR:vig01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BKP57_10525
DNA replication proteins [BR:vig03032]
Prokaryotic type
  DNA Topoisomerases
   BKP57_10525
DNA repair and recombination proteins [BR:vig03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BKP57_10525

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2 PHP NTase_sub_bind

Other DBs

NCBI-ProteinID:

API92228

Position

2381298..2383802

AA seq 834 aa
MADQQRPKVQEINLGQEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMNDLGMHA
DKAYKKSARIVGEVIGKYHPHGDSAVYEAMVRMAQDFSYRNMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELLRDINKDTIDYTDNYDGSEREPVVFPARFPNLLVNGASGIAVGMA
TNIPPHNLGETINAVLALSKDPDITIDELMEDYIHGPDFPTAGQILGRSGIRKAYETGKG
SITIRAKVTIDETANGKPRIIATELPYQVNKAKLIEKIAELVRDKRIDGITDLRDESDRE
GLRVVIELRRDANANVVLNNLYKHTALQTTFGINMLALVGGRPKVLNIKQCLEHYLEHQK
VIIKRRTAFELRKAEARAHILEGLRIALDHLDEVIKLIRNSKTADVARNGLMERFDLSEK
QAQAILDMRLQRLTGLEREKIEDEYKELKKLIEELKAILADEEKVLEIIREELTEIKERF
NDDRRSEIVIGGSDFFEDEDLIPEENIVITLTHQGYIKRLPSSTYRTQKRGGRGIQGMGT
NEDDFVEHLVSTSTHDTILFFTNKGKVYKAKGYEIPEFSRTAKGIPIINLLQVEKGEWVN
AVISVNDYRDDQFLFFTTKHGISKRTSLAQFANIRKGGLIAVGLRDEDELISVRLTDGTK
DIMIATKNGYLIRFPEKQVRPMGRNAAGVKGISLRKDDEVVSMEILQEDAKILHVTNKGF
GKQTPESEYRITNRGGKGIFTCNLTEKTGHVVAVKAVSGEEDLMLITVAGVLIRIPVESI
SVTGRNTMGVRLIRLHDEEEVATVARIDPDEDEEEQEITDHEEEASEEPESSNE

NT seq 2505 nt +upstreamnt +downstreamnt
atggcggatcaacaacgtccaaaagtacaggaaattaatctcggacaagagatgcgtaca
tcgtttctggattatgcaatgagtgttattgtttctcgtgcattgcctgacgtccgtgat
ggattaaagcctgtacatcgaagaatattatatgcaatgaatgatttaggaatgcatgca
gataaagcgtataaaaaatcagcacgtattgtcggagaggtaattggtaaatatcatcca
catggtgactcggctgtttacgaagcaatggtgcggatggctcaggatttcagctatcgg
aatatgctagtagatggacacgggaattttggttcagttgatggtgattcagcagcagcc
atgcgttatacagaagcaagaatgtcaaaaatatccatggaattactacgagatattaat
aaagatacgattgattataccgataactatgacggctcggaacgagaaccagttgttttc
cccgcgcgttttccaaatttattagtgaacggtgcttctggtattgcagtaggtatggca
acgaatatcccgccacataatttaggggaaacgataaatgctgtactcgcattaagtaaa
gatcctgatataaccattgatgaactgatggaagactatattcatggtcctgactttcca
acagcgggacagattcttggccgcagtggtattcgcaaagcgtatgaaacaggtaaaggc
tcgatcaccattcgggcaaaagttacgattgatgaaacagcaaatggtaaaccaaggatt
attgctacagaattaccatatcaagtaaacaaagcgaaattaatcgaaaaaattgccgag
cttgttcgagataaacggattgatggaattacggatttgcgtgatgaatcagaccgtgaa
ggattaagagtagttatcgagcttagacgtgatgccaatgcgaatgttgtattaaataat
ttatacaagcatacagcattgcaaacaacgtttggtattaatatgttggcacttgtaggt
ggacgtccaaaagtgctaaacataaaacaatgtcttgaacattatttagaacatcaaaaa
gtgattattaaacgcagaacagcatttgaattacgtaaagcagaagctcgtgctcatatt
ttggaagggttgcgtattgcgttagatcatttagacgaagttataaaacttattcgtaac
tccaagacagcagatgttgctcgtaacggattaatggagcgttttgatttatctgagaag
caggcgcaagctattttggatatgcgtttgcaacgtttaactggcttggaacgggaaaaa
attgaagatgaatataaggaattaaagaaactaattgaagaattaaaagcgattcttgca
gatgaagaaaaagtattagaaatcatccgtgaggagcttaccgaaattaaagaacgtttt
aatgatgatcgacgtagcgaaatagtaattggcggcagtgatttctttgaggatgaggat
ttaatcccagaagaaaatattgtcattacgttaacccatcaaggttatattaaacgtctt
ccttcctccacgtatcgtacgcaaaaacgcggtggtcgcgggatacaaggaatgggaacg
aacgaggatgattttgttgaacatctcgtttccacttctacacatgatacgattttattc
tttaccaataaaggaaaagtatacaaagcgaaaggttatgagattcctgaatttagtcga
acggcgaaagggataccaattattaatcttttgcaagttgaaaaaggtgaatgggtcaat
gcggtcatttctgttaatgactatcgggatgatcagtttctattctttacaacgaagcat
ggtatttcgaaacgtacgtccttagcgcaatttgcgaacatccgcaaaggcgggctaata
gcagtaggtcttcgtgacgaagatgagcttatatcggttcgcttaacggatggaacaaag
gatattatgattgcaacgaaaaacggttaccttattcgttttcctgagaagcaggtccgt
cctatgggaagaaatgcagccggggtaaaaggaatttcgttacgaaaagatgacgaagtt
gtttctatggaaattctacaagaggatgcaaaaattctccatgtaactaataaaggtttt
ggtaagcagacaccagaatcagaatatcgaattacgaatcgtggcggaaaaggaattttt
acttgtaatttaaccgaaaaaacgggacatgtcgtagcagtaaaggcagtgtctggagaa
gaagatttgatgttaattacggttgctggtgtgctcattcgtattcctgtagaaagtata
tcggtaacaggtagaaatacgatgggggttcggctaattcgtttgcatgatgaggaggaa
gtagcaacggttgctcgaattgatccagatgaggacgaagaggaacaggaaattacagat
catgaagaagaagcatcagaagagccagaaagtagtaatgaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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