KEGG   Virgibacillus sp. 6R: BKP57_10845
Entry
BKP57_10845       CDS       T04596                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
vig  Virgibacillus sp. 6R
Pathway
vig03030  DNA replication
vig03430  Mismatch repair
vig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKP57_10845
   03430 Mismatch repair
    BKP57_10845
   03440 Homologous recombination
    BKP57_10845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vig03032]
    BKP57_10845
   03400 DNA repair and recombination proteins [BR:vig03400]
    BKP57_10845
Enzymes [BR:vig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BKP57_10845
DNA replication proteins [BR:vig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BKP57_10845
DNA repair and recombination proteins [BR:vig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BKP57_10845
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 DnaX_C AAA_30 RuvB_N AAA_19 AAA_22 TIP49 AAA_5 PIF1 AAA_16 AAA_2 Mg_chelatase AAA_14 AAA_24 AAA_assoc_2 Glyco_tranf_2_5 AAA_28 CEP44 Rad17 AAA_7
Other DBs
NCBI-ProteinID: API92286
Position
2454943..2456634
AA seq 563 aa
MSYQALYRVWRPTVFADVVGQAHITRTLQNAIAQEKFSHAYLFSGPRGTGKTSAAKIFAK
TINCERSPVREPCNQCAACKGIQNGSISDVIEIDAASNTSVEDIREIRENVKYASSQVPY
KVYIIDEVHMISVNAFNALLKTLEEPPSHVVFILATTEPHKIPLTILSRCQRFDFKPISN
TSIINRLQTIVEAEGVTVSKEALDTVALAAEGGMRDALSILDQAISYSDESVELEDVLAV
TGGVSQHTLTNIIRHMYEKNVQQAVMELNELIQKGKDPARFVYDMIYFLRDLLLYKSAPT
LEGLLERARVDEPFQVLADTVPNQWIQEAMRQLNQCQQEIKWTNSPKVYIEIAILTIANG
IQEQVENNNSLADSDTITRLSSQVGKLEKEIKLLKENPVIPTQPASQRESRKAPNRSAKN
TYKIPYERIRHVLSEAEKSALKQVHSQWGTFLGQLKKASAPAHATIQDSKPAAASDQALI
VAFKYEIHCSLFLDNQETVESVLTSVLGKTLTIIPIPEKDWVELRNEYVAKQEKTSAKEE
MTEDPVVTEAQKLFGDDIIEIHD
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagctatcaggctttatatcgcgtttggcgtccgacggtttttgccgatgtcgttggg
caagcccatattactcgaacattgcagaatgcgattgcacaggagaaattctctcatgct
tatttattctctggaccaagaggaacaggaaaaacgagtgctgcgaagatttttgccaaa
acaatcaactgtgaacgttccccagttagggagccgtgtaatcaatgcgctgcatgtaaa
ggaattcagaatggatcgatttccgatgtcattgagattgacgctgcttccaatacaagc
gtagaggatataagagagattagagaaaatgtaaaatacgcttccagccaggtaccttac
aaagtatatatcattgatgaggtacacatgatatcggtaaatgcttttaacgccttactg
aaaacgctggaagaaccaccaagccatgtagtatttattttggcgacaacggaaccacat
aaaatcccactaaccattttatccagatgccagcggtttgattttaagccgatctccaac
acttctattatcaatcgattacaaacgattgtggaagcagaaggggttactgtatctaag
gaagctttagacaccgtagcattggctgctgaaggtgggatgcgtgatgcgttaagtatt
cttgatcaagctatctcctacagtgatgaatccgtagaactggaggatgttttagctgtt
actggtggggtctcccaacacacattaacgaatattattcgtcatatgtatgaaaaaaat
gtccagcaagcggtaatggaattgaatgaattaattcaaaaaggaaaagatcctgctcgc
ttcgtttatgatatgatttatttcttgcgtgatttgctgttatacaagagtgctccaaca
ttggaaggattattggaacgagcgagggtggatgagccttttcaagtgttagcagatact
gtaccaaaccaatggatacaggaagcaatgagacaattaaatcagtgtcaacaggaaata
aaatggacgaatagcccaaaagtttatattgaaattgctattttaacgatagccaatggt
atacaggaacaagtggaaaacaataattccttggcagattcagatacgattacaagactt
tcttcacaagttggcaagctggaaaaggaaatcaagctgctgaaggaaaatccagtcata
ccaacacagccagcatcacagcgtgaaagcagaaaagcacctaatcggtctgcaaaaaac
acgtataaaataccttacgagcggattcgacatgtgttgagtgaagcagaaaaatcagcc
ttaaagcaagttcactcccaatggggaacatttttagggcaattgaaaaaggcaagcgct
cctgcacatgctacgattcaggatagtaaacccgcagcagcatccgaccaagcgcttatc
gtagcgtttaaatatgagattcactgttcattgtttttagataatcaggaaacggtggaa
tccgttttgacttctgtattaggaaaaacgttgaccattattccgatcccagagaaggat
tgggttgaacttcgcaatgagtatgttgccaaacaagaaaaaacatccgccaaagaagaa
atgactgaagatccagttgtgacagaagcacagaaactttttggtgatgatataatagaa
attcacgattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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