KEGG   Vibrio natriegens: PN96_10935
Entry
PN96_10935        CDS       T04636                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vna  Vibrio natriegens
Pathway
vna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PN96_10935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vna03019]
    PN96_10935
Messenger RNA biogenesis [BR:vna03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PN96_10935
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ALR16450
Position
1:complement(2388825..2389346)
AA seq 173 aa
MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGL
TKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESRINMQRGKSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKAKGKRKKQRRG
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgatagatggcgatggttaccgactgaatgttggtattgtgatatgtaataaccatggt
caggtcttctgggctaaacgatacgggcaacactcatggcaatttccacaaggtggaatt
gacgaaggtgaaacacctgagcaagcaatgttcagggagttatatgaagaagtcggttta
acgaaaaaagacgttaaaatcattgcaacaagtcgtcattggttaagatataagctacca
aagcgactggtgcgttgggactccaagcctgtttgtatcggccaaaaacagaaatggttt
ctgttgcgattggaatgcgatgaatctcgcattaatatgcaacgtgggaaatcccctgaa
tttgatggttggcggtgggtaagttattggtacccggttaggcaagttgtttctttcaag
cgagacgtataccgtcgagcaatgaaagagtttgcttctttagccatgccttttcgagaa
agaaaagcgaaagggaaaagaaaaaagcaacgtagaggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system