KEGG   Vibrio parahaemolyticus RIMD 2210633: VP1391
Entry
VP1391            CDS       T00120                                 
Name
(GenBank) putative transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpa03000]
    VP1391
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP1391
Transcription factors [BR:vpa03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VP1391
Secretion system [BR:vpa02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   VP1391
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_50 GAF AAA_5 GAF_3 AAA_2 AAA_3
Other DBs
NCBI-ProteinID: BAC59654
UniProt: Q87PV9
Position
1:complement(1491226..1492857)
AA seq 543 aa
MRSANHSELSNALLAISQSLADRSQLTQTLDAVLTAARQMTLAKHGIIYVLDQTGQALIP
STAHHNDKTIVSHPWEALQIDSASENDPFNFAIRNGEVVLINELYKYKGYDCESIYQTEQ
TLGLKSENLLAWPLIDSESKTIGLLVLLDLNVIDNEAALTEFCRMAASNIRQAVWLEQYG
QVIKSLSADNQALVRENTQLKKRTQKAYQGPIAESEEMLNVLNRLDKVLSLPVDVLLRGE
TGAGKEVIAKYIHENSNRSEQPLIVQNCAAIPEQLLESELFGHKKGSFTGADKDKVGLFE
AANGGTLFLDEIGDMPMLLQAKLLRVLQERKVRPIGTSKEIEVDVRVIAATHCNLMQQIK
DGGFRADLFYRLNVFPITLPPLRARKSDIIPLAEHFVQHTTNTLGLPQAPGLSANVRKQL
LAYQYPGNVRELKNIIERSVLLSDFETITHIEFGEQIPEDVPNIDMKAASPTPDQPAYER
QAQADLEDASKSLKDVVSQYERTVIIDCLNACNWHTKKAAEQLALPMSTLNHKMKKYDIS
AAG
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcgttcagctaaccatagcgaacttagcaacgccctacttgcgatcagccaatctttg
gctgatcgcagccagcttacccaaacattggatgccgtgttgaccgctgcgagacaaatg
accttagcaaagcacggcatcatttatgttttggaccagacaggacaggcgttgattcca
agtaccgctcaccataacgataaaacgattgtttcccacccttgggaggcattgcagatt
gattccgctagtgagaacgacccatttaactttgccattcgtaatggtgaagtggttttg
attaacgagttatacaaatacaaaggctacgactgcgaaagcatttatcaaacagagcag
acattgggactaaaaagcgagaacttactggcttggcctttgattgatagcgaaagcaaa
accattgggctgttagtcttactcgatttgaacgtcatcgataacgaggcagccttgact
gagttttgtcgtatggctgcgagtaatattcgccaagccgtttggttagagcaatatggg
caagtgattaaaagcctcagtgccgataatcaagccctagtgcgcgagaacactcagctc
aaaaaacgtactcagaaagcctatcaaggtcctattgcagagagcgaagaaatgctcaat
gtcttgaatcgtcttgataaggtgctatctcttcctgtagacgttctgttgcgtggtgaa
acgggcgctggtaaagaggtgatcgcgaaatacattcacgaaaactccaaccgttcagaa
cagcctttgatcgtacaaaactgtgcggcaattcccgaacagttgttagagtctgaactg
tttgggcataagaaaggttcattcacgggcgcggacaaagacaaagtcggtttgtttgaa
gcagccaacggcggcacgcttttcctagatgaaattggcgatatgccaatgctactacaa
gcgaagttactgcgtgtactgcaagagcgtaaagttcgccctatcggtaccagcaaagag
attgaagtcgacgttcgcgttatcgctgcaacccactgtaatcttatgcagcaaatcaaa
gatggcggattccgtgccgatttgttctatcgtttgaatgtgttccctattacattacca
ccattgagagctcgcaagtcagacattattccccttgccgaacatttcgtgcaacacaca
accaacacgctaggtttgccgcaagcgccagggttaagtgccaacgtacgtaaacagctc
cttgcctaccaatacccagggaacgtgcgtgagcttaagaacatcattgagcgctcggtg
ctactgtccgattttgaaaccattactcacattgagtttggcgaacaaatcccagaagat
gtgccaaatatcgacatgaaagcagcctcacctaccccagaccaacctgcttacgagcgg
caggcacaagcggatttagaagacgcctcaaagagccttaaggatgttgtcagccaatac
gagcgtacagtgatcatcgattgcttaaatgcgtgtaattggcacaccaagaaggccgct
gagcaattggcgctgccaatgagcactctcaaccataagatgaagaaatacgacatttct
gcggcaggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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