KEGG   Vibrio parahaemolyticus RIMD 2210633: VP2468
Entry
VP2468            CDS       T00120                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00550  Peptidoglycan biosynthesis
vpa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VP2468
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vpa01002]
    VP2468
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpa01011]
    VP2468
Enzymes [BR:vpa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     VP2468
Peptidases and inhibitors [BR:vpa01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   VP2468
Peptidoglycan biosynthesis and degradation proteins [BR:vpa01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   VP2468
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase Peptidase_S11
Other DBs
NCBI-ProteinID: BAC60731
UniProt: Q87LZ0
Position
1:2590948..2592369
AA seq 473 aa
MRLRWPLLISSLIFPLLSYAYPHQEVLPEGARISLVAEKLTESSTLDGIRPTDQLFPPAS
TLKIVTALAAKLELGDSFAFRTKLETSSSDAVIYFVGDPTLQTQDLKALLSLAKKNGLTR
INGDLWLDNSAFTGYDRAVGWPWDILGVCYSAPASSITLNNNCVQASIYTQKDGGTRVYV
PEHQPIRVKSSVETVSKTIQKSRHCDLDLLANPDNRYELKGCLVEREKPLPLKFAVQDPE
RYTSQNISTLLKQLGIELKGKIKIGSAPQKQRKLMALHQSKPLSDLLDDMLKHSDNLIAD
TLTKTLGAKFFVQPGSFTNGTEAIKQIIFANTGIDIRNARLEDGSGLSRNNRISANKMAE
ILRYIWKNEKTLKLIAIMPKSGESGTLQYRQSMRNAPIKGQLIAKSGSLYGTYNMAGYGL
DKNGQPNTIFVQFVSDYFPEKRDDNKPVIAPITHFEQLFYRDIVNFSQAIPKK
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcgtttacgttggcctctactcatttcttctcttatttttccgctattgtcttatgcg
tatcctcatcaagaggtattgccagagggcgcccgtatcagcttagttgcagaaaaacta
accgaaagttctacgctcgatggtatccgtccaacagaccaactatttccacctgcgagc
accttaaaaattgtcacagccttagctgctaaattagagttaggggacagctttgcattt
cgaacaaagcttgaaacctcgagttccgatgccgttatctactttgtcggagatcccacc
ttacaaacccaagatttgaaagcgttgctgtcattggcgaaaaaaaatggtttaacgcgc
attaacggtgacttgtggttagacaacagtgcctttacagggtatgaccgagcggtaggt
tggccgtgggacattctgggggtttgctacagcgctccggcttctagcattacactcaac
aacaactgtgtccaagcttctatctatacgcaaaaagatggcgggactcgagtctatgtg
ccagagcatcaacctattcgtgttaaaagttcggtcgagaccgtttctaagacgattcaa
aagagccgccattgcgatttagacctgcttgctaacccagacaatcgctacgaattaaaa
ggatgcttagtcgaacgagaaaagccgctgcctctcaaatttgcggttcaagatcctgaa
cgttacaccagtcaaaatatcagtacattactcaaacaattaggtattgagctcaaaggc
aaaattaaaattggttcagcgccacagaaacaacgtaaattgatggcattacatcaatca
aagccgctatccgatttacttgatgacatgctcaagcattctgacaatttgatcgcagac
acattaacgaaaacattgggtgcgaagttttttgttcaacccggaagttttaccaatggt
acagaagcgatcaaacagatcattttcgccaatactggcatcgatattcgtaacgcacgc
ttggaagatggatcgggcctttcaagaaacaaccgtatttctgcgaacaaaatggcagaa
atcctacgttatatctggaaaaacgaaaaaacactgaagctgattgccatcatgcctaaa
tcaggcgagtcgggtacgctgcaataccgccaaagcatgcggaatgccccaattaaaggt
caactgattgcgaagagtggttcattgtacggaacctacaacatggcgggttatggttta
gataaaaatggccagccgaatactattttcgtacagtttgtctcagactacttcccagaa
aaaagggacgataacaaacctgtcatcgcccctattacgcattttgagcagttattttac
cgtgacatcgtgaattttagtcaggcaatacctaagaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system