KEGG   Vibrio parahaemolyticus BB22OP: VPBB_2726
Entry
VPBB_2726         CDS       T02409                                 
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03030  DNA replication
vpb03430  Mismatch repair
vpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VPBB_2726
   03430 Mismatch repair
    VPBB_2726
   03440 Homologous recombination
    VPBB_2726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpb03032]
    VPBB_2726
   03400 DNA repair and recombination proteins [BR:vpb03400]
    VPBB_2726
Enzymes [BR:vpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VPBB_2726
DNA replication proteins [BR:vpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VPBB_2726
DNA repair and recombination proteins [BR:vpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VPBB_2726
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: AGB11177
Position
1:3047674..3048303
AA seq 209 aa
MNWLQRKYWHYKLKGSPYQSLFCAPHKTEFVSLDCETTSLDPNRAELVTIAATKIIDNRI
LTSQPFEVRLRAPQSLDSGSVKIHKIRHQDLADGISEKEALLKLLAFIGNRPLVGYHIRY
DKKILDLACQRQLGFPLPNPLIEVSQIYHDKLERHLPNAYFDLSLDAICKHLELPIQDKH
DALQDAISAALVFVRLTKGDLPNLTAPYT
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaactggttacaacgcaaatattggcattacaaactgaaaggctcgccttatcagtcg
ctgttttgtgcgccacacaaaaccgagtttgtgtctctagattgtgagaccaccagcctt
gatccgaaccgtgctgagttggtaaccatcgcggcaaccaagatcatcgacaaccgcatc
ctgaccagtcaaccttttgaagtacgcttacgtgcaccccaatcgttagattctgggtca
gtgaaaattcataaaattcgccaccaagatctggctgatggtatcagcgagaaagaagcg
ttgctgaaactgctcgcgttcatcggcaaccgtcctttagtcggatatcacattcgctat
gacaaaaaaattctcgaccttgcctgccaaaggcaactcggcttcccattgccaaaccca
ttgattgaagtcagccagatttatcacgacaaattagaacggcatttacccaatgcctac
ttcgacttaagtctggatgcgatttgcaagcacctggaactgcccattcaagataaacac
gacgcactgcaagatgcgatttctgccgccttggtttttgtgcgcctcaccaagggcgat
ctgccaaatctcaccgcgccatacacataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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