KEGG   Vicugna pacos (alpaca): 102531599
Entry
102531599         CDS       T08098                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vpc01009]
    102531599 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:vpc04515]
    102531599 (PCDH20)
Protein phosphatases and associated proteins [BR:vpc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102531599 (PCDH20)
Cell adhesion molecules [BR:vpc04515]
 Cadherins
  Protocadherins
   102531599 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 102531599
NCBI-ProteinID: XP_006219091
UniProt: A0A6I9IUC0
Position
14
AA seq 951 aa
MRGRGDARSSSALAVSWRPATWHPRLDMGRLSRPMSSFNYRNLPRLLLFFLFVGSFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRAGSRDPQSQPTEHSGTELNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREELCLEGGGGAAWGGSISISSSRSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAMDPDIG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIANEIDGIVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLEGEGPFRLSPY
KPYNNEYLLETTKPLDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLTKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPRESVATVAITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKESEINIEEKQPQISIEPTHRKVEPGSCMPTLVALSVISLGS
ITLVTGMGIYICLRRGKMHHREDENLEVQIPLKGKIDLNVRERKPMDISNI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcgcggccgaggggatgcgcgcagctcgtcggccctggcagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcgtctaagtcgtcccatgagcagcttcaactac
agaaacctgccgcgtctgcttctgtttttcctcttcgtgggatccttcaattgcctggcg
agttacagccgggccacggagcttctgtacagcctgaacgaaggactgcccgccggggtg
ctcatcggcagcctggcggaggacctgcggctcttgccccgcgcggggagccgggacccg
cagtcgcagcctacagaacacagcgggactgagctgaacccccctctctccttcagcctg
gcctcccagggactgagtggccagtatgtgaccctagacaaccgctctggggagctgcac
acttctgcccaggaaattgaccgggaagagctgtgtcttgaagggggtggaggggctgcc
tggggtggcagcatttccatctcctcttcacgttccgctgactcttgtcttttgcttctg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaatgccccgcagttccctgtttcccaaatatcggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagaacatcctgccatggacccagatataggc
actaacggggttcagacctaccgcctactagactatcatcgtatgttcaccctggacgtg
gaggagaatgagaatggggagcgcaccccatatctaattgtcatgggactgttggacagg
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ttgggcagcgccactctcaccattggtataagtgacattaatgacaattgccctctcttc
acagactcacagattaatgtcactgtgtatgggaatgctacagtgggcacacccattgca
gctgtccaggctgtggatagagacttgggaaacaatgctcagattacctactcttatagc
cagaaagttccacaggcatccaaggatttattccatctggatgaaaccactggagtcatt
aaactgttcagtaaaattggaggaagtgttctgcaaacacacaagctcaccatccttgct
aacgggccaggttgcatccctgcagtgatcactgccctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgtccctcgttatatagcaaatgagatagatggtatcgtttac
ctgaaagaactggaacctgttaacactccaattgcattcttcaccataagagatccggaa
ggtaaatacaaggtgaactgctacctggagggtgaaggaccattcaggttatcaccctac
aaaccatacaataatgaatatttgctagaaaccacaaagcctttggattatgaactccag
cagttctatgagatagctgtggtagcctggaactctgagggatttcatgtcaaaaaaatt
attaaagtgcaacttttagatgataatgataatgctcctgttttccttcaacccttggta
gaattaaccattgaagaaaacaatgcacccaatgcctttttgaccaagctagatgctaca
gatgctgacagtggagagagaggccaagtttcatattttctgggacctgatgctccgtca
tatttttctttagacagtgtcacaggaattctgacagtttctactcagctggaccgagaa
gagaaggaaaagtacaggtacaccgtcagagctgttgactctgggaagccgcccagagaa
tcagtagccaccgtggctatcacagtgctggataaaaatgacaatagccctaggttcatc
aacaaggacttcagcttctttgtaccagagaactttccaggatatggtgagattggagta
attagtgtaacagatgccgatgctgggcagaatggatgggtcgccctctccgtggtgaac
cagagcgatatttttgtcatagacacaggaaagggcatgctgagagctaaagtctccttg
gacagagagcagcagagctcctatactttgtgggttgaagctgttgatgggggtgagcct
cccctctcctccactgcaaaaatcacaattctccttctagatatcaatgataatcctcct
cttgttttatttcctcagtctaacatgtcctaccttttggtactaccctctactctccct
ggctccccagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtcctttaggattgaccctaaa
acgggcaacattactttggaagaggcattgctgcaaacagactatgggctccaccgcttg
ctggtaaaagtgagtgatcatggttatcctgaacctctccattccacagtcatggtgaac
ctgtttgtcaatgacacagtcagtaatgagagctacattgagagtcttttaagaaaagaa
tcagaaattaatatagaggagaaacaaccgcagatctcaatcgaaccgactcataggaaa
gttgaacctgggtcttgtatgcccaccttagtagctctgtctgtaataagcttgggttct
atcactcttgtaacagggatgggcatatacatctgtttaaggagagggaagatgcatcat
agggaggatgaaaatttggaagtacaaattccattaaaaggaaaaattgacttgaatgtg
agagagaggaaaccaatggatatttctaatatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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