KEGG   Variovorax paradoxus B4: VAPA_1c29740
Entry
VAPA_1c29740      CDS       T02835                                 
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  KO
K01770  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00900  Terpenoid backbone biosynthesis
vpd01100  Metabolic pathways
vpd01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    VAPA_1c29740 (ispF)
Enzymes [BR:vpd01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     VAPA_1c29740 (ispF)
SSDB
Motif
Pfam: YgbB
Other DBs
NCBI-ProteinID: AGU50067
UniProt: T1XAW5
Position
1:complement(3137206..3137700)
AA seq 164 aa
MTAPFNIRVGEGWDVHQLVAGRKLILGGVEVPHTTGLLGHSDADVLLHAITDALLGAAGL
GDIGRHFPDTDAQFRGADSAVLLGEAARRVRAAGWEIGNVDSTVIAQAPKLAPHIPAMCR
RIAETLGLAPDQVNVKAKTAEKLGPVGEGRAMEARAVVVLHRQG
NT seq 495 nt   +upstreamnt  +downstreamnt
atgacggccccattcaatatccgcgtgggcgagggctgggacgttcaccagctggtggcg
gggcgcaagctgatcctcggcggcgtggaggtgccgcacaccaccggcctgctggggcat
tcggacgccgacgtgctgctgcacgccatcaccgatgccttgctcggcgcggcgggcctg
ggcgacatcggccggcacttccccgacaccgacgcgcagtttcgcggcgcggattcagcg
gtgctgctcggcgaagcggcgcgccgcgtgcgcgccgcaggctgggagatcggcaacgtc
gacagcacggtgatcgcgcaggcgcccaagctggcaccgcacattccggccatgtgccgg
cgcatcgccgagaccctgggccttgcgcccgaccaggtcaacgtgaaggccaagacggcc
gaaaagctcggcccggtcggcgaaggccgcgcaatggaagcccgcgcggtggtggtgctg
caccgccagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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