KEGG T01392: Varpa

Variovorax paradoxus EPS: Varpa_0299

Entry

Varpa_0299 CDS T01392

Definition

homogentisate 1,2-dioxygenase (EC:1.13.11.5)

Orthology

K00451

homogentisate 1,2-dioxygenase [EC:1.13.11.5]

Organism

vpe Variovorax paradoxus EPS

Pathway

vpe00350	Tyrosine metabolism
vpe00643	Styrene degradation
vpe01100	Metabolic pathways
vpe01120	Microbial metabolism in diverse environments

Class

Metabolism; Amino acid metabolism; Tyrosine metabolism [PATH:vpe00350]
Metabolism; Xenobiotics biodegradation and metabolism; Styrene degradation [PATH:vpe00643]

SSDB

Motif

Pfam:

HgmA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(315652..316959)

AA seq 435 aa
MTDIPATERRYLGGFGNEYASEAVPGALPQGRNNPQRGPFDLYTELLSGTAFTAPRHENR
RTWLYRRQPSVVSGRYQPYAQPHWTTGGAREIALPPEPMRWHPMPLDGAAEADFIDGMHT
VAANGDAESQVGIGSLMYLAGRSMDKRAFVNADGEMLVVPQQGRLVITTELGVLDVKPGE
IAVLPRGMVFKVALPDGLSRGYVCENYGAHFRLPELGPIGSNGLANARDFQAPVAAFEED
GGAYELVKKFAGRFWKAPTKQSPFNVVAWHGNLAPVKYDTARFMAIGSISFDHPDPSIFT
VLTSPSDTPGTANCDFVIFPPRWMVMENTFRPPWFHRNLMSEFMGLVLGEYDAKPGGFKP
GGASLHNCMVPHGPDEEAFDKATHADLKPHKLDNTLAFMFESRFRFIPTNFALKSPALDT
DYADCWAGLKDQFKP

NT seq 1308 nt +upstreamnt +downstreamnt
atgaccgacattcccgccaccgaacggcgctacctcggcggcttcggcaacgaatacgcc
tccgaagctgtgcctggcgccctgccgcagggccgcaacaacccgcagcgcgggcccttc
gatctctacaccgaactgctctcgggcaccgccttcaccgcgccgcgccatgagaaccgc
cgcacctggctctaccgccgccagccctcggtggtgtcaggccgctaccagccctacgca
cagccgcactggacgaccggtggcgcccgcgagatcgcgctgccgcccgagccgatgcgc
tggcacccgatgccgctcgatggcgcggccgaggccgacttcatcgacggcatgcacacg
gtcgcggcgaacggcgatgccgaatcgcaggtcggcatcggctcgctgatgtacctggcc
ggccgctcgatggacaagcgcgccttcgtcaacgccgacggcgagatgctggtcgtgccg
cagcaaggccgcctcgtcatcacgacggaactcggcgtgctcgacgtgaagcccggcgaa
atcgcggtgctgccgcgcggcatggtcttcaaggtggcgctgccggacggtctctcgcgc
ggctacgtctgcgagaactacggcgcgcatttccggctgcccgagctgggtcccattggc
tcgaacggcctcgcgaacgcgcgcgatttccaggcacccgtggcggcgttcgaggaagac
ggcggcgcctatgaactggtcaagaaattcgccggccgcttctggaaagcgccgacgaag
cagtcgcccttcaacgtggtcgcctggcacggcaacctcgcgccggtgaagtacgacacg
gcgcgcttcatggccatcggctcgatcagcttcgaccatcccgatccgtcgatcttcacc
gtgctgacatcgcccagcgacacgcccggcaccgccaactgcgacttcgtgatcttcccg
ccgcgatggatggtgatggagaacaccttccgtccgccctggttccaccgcaacctcatg
agcgagttcatgggcctggtgctcggcgaatacgacgccaagccgggcggcttcaagccc
ggcggcgcgagcctgcacaactgcatggtgccgcacggcccggacgaggaagccttcgac
aaggcgacgcacgcggacctcaagccccacaagctggacaacacgctggccttcatgttc
gagagccgctttcgcttcattccgacgaacttcgcgctgaagagcccggcgctcgacacc
gactacgccgactgctgggcggggctgaaggaccagttcaagccatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-VPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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