KEGG   Variovorax paradoxus EPS: Varpa_2716
Entry
Varpa_2716        CDS       T01392                                 
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Varpa_2716
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_2716
Enzymes [BR:vpe01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     Varpa_2716
Transporters [BR:vpe02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Varpa_2716
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 AAA_30 DUF2721 RsgA_GTPase AAA_22 AAA_29 AAA_21 AAA SRP54 NTPase_1 AAA_5 Rad17 MobB NB-ARC AAA_23 NACHT TsaE APS_kinase AAA_28 AAA_24 nSTAND3 AAA_33 AAA_15
Other DBs
NCBI-ProteinID: ADU36914
UniProt: E6V2U4
Position
complement(2927657..2929441)
AA seq 594 aa
MQASPGSETPRPPLMRRLARLMTWFGSSRKWWAVGLCGAMLAAITEPLMAALLKPLLDRG
FTRGEMPLWFVPAAVLLLFAVRGIAQFISQYALSRIANEGMQKLRRVLFERLLGAELALF
TRQSASALSNTVVYEVQTGAMLLVQALLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVP
SISWIMKVFSKRLYKLTQQGQQATDELAYVVEENVLAHRVVRLHGAEQAQERRFEQLSQR
LNRLAVKSTIAQAATTPLTQMMASLALSIVVMIALWQSGKQGFTVGGFVAYITAMLMLIA
PIRRLAEVAGPITRGLAALERGLILVDEVAPESQGSFEMAHADGHIELRNVQVSYRGDDE
QRALDGVSLTIQPGQVVAFVGPSGSGKTTLVNLLPRFVQPSGGQVLLDGHDTSEWKLKSL
RAQFAMVSQDVVMLNDTLAANVALGSEIDRERVNECLVAANLSAHVENLPQGMDTVLGHN
ATQLSGGQRQRLAIARALYKNAPVLLLDEATSALDTESERLVQDALHRLMQNRTTLIVAH
RLSTIQHADRIIVMEQGRIAEQGSHAQLMALDGLYARLQTLAVRSATPGQDPTL
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcaagcatcccctggcagcgagaccccgcgccctcccctgatgcgccgtctggcgcgt
ctcatgacctggttcggcagctcgcgcaaatggtgggccgtgggcctctgcggggccatg
ctggcggccatcaccgagccgctgatggccgcgcttctgaagccgctgctcgaccgcggc
ttcacccgcggggagatgccgctgtggttcgtgcccgccgccgtgctgctgctgttcgcc
gtgcgcggcatcgcgcaattcatctctcaatatgctttgtcgcgtatcgccaatgaaggc
atgcagaagctgcgccgggtgctgttcgaacgcctgctcggcgccgagctcgctctcttc
acgcgccagtcggcgagtgcgctgtcgaacacggtggtgtacgaggtgcagaccggcgcg
atgctgctggtgcaggcgctgcttgggctttcacgcgatggcttcacgctcatcgcgctt
ctgggctacctggtctatctgaactggaagctgacgctgatcgtcgcgtttctcgtgccc
agcatctcctggatcatgaaggtgttctccaagcgcctctacaagctcacacaacagggc
cagcaggctaccgacgagctggcctacgtggtcgaggagaacgtgctcgcccatcgcgtc
gtgcgactgcatggcgccgagcaggcccaggagcgccgcttcgaacaactgagccaacgg
ctcaaccgcctggccgtgaagtccaccatcgcccaggccgcgaccacgccactcacgcag
atgatggcttcgctcgcgctgtcgatcgtcgtgatgatcgccctctggcaaagcggcaag
cagggcttcaccgtcggtggattcgtcgcctacatcaccgccatgctcatgctgatcgcg
ccgatccggcgcctcgccgaagtggccgggccgatcacgcgcgggcttgctgcgctggaa
cgcggcctgatcctggtcgatgaggtcgcgcccgaatcgcaaggcagcttcgagatggcg
cacgccgatggccacatcgagctgcgcaacgtgcaggtcagctaccgcggcgacgatgaa
cagcgcgcgctcgacggcgtgagcctgaccatccagcctggccaggtggtggctttcgtc
ggcccttcaggctctggcaagaccacgctggtcaacctgctgccgcgcttcgtgcagccc
agcggcgggcaggtgctgctcgatggtcacgacaccagtgagtggaaattgaagagcctg
cgcgcgcagttcgcgatggtgagccaggacgtggtcatgctcaacgacacgctggcggcc
aatgtggcactgggctcggagatcgaccgcgaacgcgtcaacgaatgcctggtcgccgcc
aacctgagcgcccacgtcgagaacctgccgcagggcatggacacggtgctgggccacaac
gccacgcagctctccggcggccaacgccagcgtctcgcgatcgcgcgcgctctctacaag
aacgcgccggtactgctgctcgacgaagccacctcggcgctcgacaccgaatcggaacgg
ctggtgcaggatgccctgcatcgcctgatgcagaaccgcaccacgctgatcgtggcgcat
cggctctcgaccatccagcatgcggaccgcatcatcgtgatggagcaaggccgcattgcc
gagcaaggcagccacgcgcagttgatggcgctcgacgggctctatgcacgcctgcagacg
ttggccgtgcgcagtgcgacgccggggcaagacccgacgctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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